Query= MSMg01no336_k10.b1 MSMg01no336_k10.b1 CHROMAT_FILE:
MSMg01no336_k10.b1 PHD_FILE: MSMg01no336_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:46 2005
(582 letters)
>mm_chr7_147348296_147349267
Length = 972
Score = 996 bits (515), Expect = 0.0
Identities = 559/579 (96%), Gaps = 12/579 (2%)
Strand = Plus / Minus
Query: 5 gaattctctctgacccatccctgc-aacaaggctgacccgtcctgggagccccagcagag 63
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 772 gaattctctctgacccatccctgcaaacaaggctgacccgtcctgggagccccagcagag 713
Query: 64 aaacatccctcggtcctgggatgggatggtgtggcagcacttgcctttgagactccagca 123
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 712 aaacatccctcggtcc-----tgggatggtgtggcagcacttgcctttgagactccagca 658
Query: 124 gggcctcaacagatctgaccaataaaacagtgacctgggcccatcacacgggacacttga 183
||||||||||||||||||||||||||||| | |||||||||||| |||||||||||
Sbjct: 657 gggcctcaacagatctgaccaataaaaca---a---gggcccatcacatgggacacttga 604
Query: 184 gggcactcgttccagggtgctcggaagtggcctctccagctagaaagggccatgagcaac 243
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 603 gggcacttgttccagggtgctcagaagtggcctctccagctagaaagggccatgagcaac 544
Query: 244 cgcagcaacaacgctttggtgacagagttcattcttctgggtttcccagagctgtgccat 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tgcagcaacaacgctttggtgacagagttcattcttctgggtttcccagagctgtgccat 484
Query: 304 ctacaagggctgctatttgggttcttcctcatcatctatgtggtgactgtcctagagaac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ctacaagggctgctatttgggttcttcctcatcatctatgtggtgactgtcctagagaac 424
Query: 364 ctggtcattgtgggcaccatcagtgctagccggcagctacacacacctatgtacttcttc 423
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 423 ctggtcattgtgggcaccatcagtgctagccggcagctacacacacccatgtacttcttc 364
Query: 424 ctggccaatctgtctgtgctcgagaccctctacaccacagtcacagtgcccaagctgctt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ctggccaatctgtctgtgctcgagaccctctacaccacagtcacagtgcccaagctgctt 304
Query: 484 gctggcctcctagcaggggcaaaaaccatctccttctcagggtgcctcacccagctgttc 543
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 303 gctgacctcctagcaggggcaaaaaccatctccttctcggggtgcctcacccagctgttc 244
Query: 544 ctctttctttcgctgggctcctctgagtgtttcttactg 582
||||||||||| |||||||||||||||||||||||||||
Sbjct: 243 ctctttctttctctgggctcctctgagtgtttcttactg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 972
Length adjustment: 10
Effective length of query: 572
Effective length of database: 962
Effective search space: 550264
Effective search space used: 550264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_k10.g1 MSMg01no336_k10.g1 CHROMAT_FILE:
MSMg01no336_k10.g1 PHD_FILE: MSMg01no336_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:46 2005
(611 letters)
>mm_chr7_147295742_147296752
Length = 1011
Score = 1127 bits (583), Expect = 0.0
Identities = 604/611 (98%)
Strand = Plus / Plus
Query: 1 ttttctgcacattggatggcttcttcaaccagtttttcaacaggaaaaatcttgcttaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttctgcacattggatggcttcttcaaccagtttttcaacaggaaaaatcttgcttaca 260
Query: 61 agacctaaaacatgaaaagtctgaatattatgcagaaatatccctgtccacttcctctag 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 agacctaaaacatgaaaagtctgagtattatgcagaaatatccctgtccacttcctctag 320
Query: 121 aacccagtgacatcgagaggccagttctctgggtccttaacaagggatggctgtccccag 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 aacccagtgacatcgagaggccagttccctgggtccttaacaagggatggctgtccccag 380
Query: 181 cagtgggtgactctgggctctccactgacgggctccagtcacatgctgtctacaggatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtgggtgactctgggctctccactgacgggctccagtcacatgctgtctacaggatca 440
Query: 241 aacggaacagaggacttgaggactgtggtcactggcaagggcaggaaaaaaggctggcct 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatggaacagaggacttgaggactgtggtcactggcaagggcaggaaaaaaggctggcct 500
Query: 301 ttaagagcttttaaaggcagtggaaagagatgttgttattatttctaacctgaacatatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaagagcttttaaaggcagtggaaagagatgttgttattatttctaacctgaacatatg 560
Query: 361 ttgccactctctggtatatgatgtatttcaagatataaaagctaaggacagaaccttagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgccactctctggtatatgatgtatttcaagatataaaagctaaggacagaaccttagg 620
Query: 421 gctccaacaccagctacccatagggacacctgaagcagcctatgacttccccagctccca 480
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 621 gctccaacaccagctacccacggggacacctgaagcagcctatgccttccccagctccca 680
Query: 481 gcatcagatacctcacctgcctgctttgcatcctgggctgagatgcggtcaccagtgagg 540
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 681 gcatcagatacctcacctgcctgctttgcatcctgagctgagatgcggtcaccagtgagg 740
Query: 541 accatctccattgctagcgatttgccgactgctcgggtgagtctctgagtgcctccagca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 accatctccattgctagcgatttgccgactgctcgggtgagtctctgagtgcctccagca 800
Query: 601 cctacagggag 611
|||||||||||
Sbjct: 801 cctacagggag 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
