Query= MSMg01no336_l22.b1 MSMg01no336_l22.b1 CHROMAT_FILE:
MSMg01no336_l22.b1 PHD_FILE: MSMg01no336_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:54 2005
(466 letters)
>mm_chr7_86094574_86095439
Length = 866
Score = 837 bits (433), Expect = 0.0
Identities = 459/473 (97%), Gaps = 10/473 (2%)
Strand = Plus / Minus
Query: 4 ggaattcctgggccatgcctcaagtgagtggcctggtccctccagtggtcctacgtgccc 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 ggaattcctgggccatgactcaagtgagtggcctggtccctccagtggtcctacgtgccc 763
Query: 64 tctctatacataaactgtaagcttatttgcatcccaatgtggccagtgcttcacatctat 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 tctctatacataagctgtaagcttatttgcatcccaatgtggccagtgcttcacatctat 703
Query: 124 ttctacccctgtaaaacacacacacacacacacacac--------acacacacacacaca 175
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 702 ttctacccctgtaaaacacacacacacacacacacacacacacatacacacacacacaca 643
Query: 176 cacacacacac--acacacacacacacacacacagagtgtctcccagagcccttctacag 233
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 cacacacacacatacacacacacacacacacacagagtgtctcccagagcccttctacag 583
Query: 234 gagtcatggcccccatctctcctcacagacattgtgaagttaacatgtattgcccttatt 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gagtcatggcccccatctctcctcacagacattgtgaagttaacatgtattgcccttatt 523
Query: 294 taacagctaccaagagagtcataggtggattacagtgactgctataattcaggcatgcta 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 taacagctaccaagagagtcataggtggattacagtgactgctataattcaggcatgcta 463
Query: 354 ttatcctgtgactggatagttgccactatcggaatactaggaaaagctcctaaatcagtg 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ttatcctgtgactggatagttgccactatcggaatactaggaaaagctcctaaatcagtg 403
Query: 414 gttctcaacctgtgggttgtgacccctttgcaggtcagatgtcccttttacag 466
|||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 402 gttctcaacctgtgggttgtgatccctttgcaggtcagatgtctcttttacag 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 108
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_l22.g1 MSMg01no336_l22.g1 CHROMAT_FILE:
MSMg01no336_l22.g1 PHD_FILE: MSMg01no336_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:54 2005
(499 letters)
>mm_chr7_85886736_85887634
Length = 899
Score = 919 bits (475), Expect = 0.0
Identities = 493/499 (98%)
Strand = Plus / Plus
Query: 1 ctccctgggaaaatctgttctaagaaagtaattgcatgggaaagcagattcctgcagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctccctgggaaaatctgttctaagaaagtaattgcatgggaaagcagattcctgcagaag 260
Query: 61 gaaatatattgatgcaattaacaaaggtttggaaacaagtgccctgaaacaagggattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaatatattgatgcaattaacaaaggtttggaaacaagtgccctgaaacaagggattga 320
Query: 121 ttacacaattacgccgattatgatattatttctccagtggcatgccatgagtaaaataat 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttacacaattatgccgattatgatattatttctccagtggcatgccatgagtaaaataat 380
Query: 181 accgatattatatttattatccagaatataataaatgagaagattatgtacaatgggatc 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 accgatattatatttattatccaggatataataaatgagaagattatgtacaatgggatc 440
Query: 241 ctgttcctgtcaatcatagagatttattcatgtacacagggaaagttggaaaagatgcag 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 ctgttcctgtcaatcatagagatttattcatgtacacagagaaagttggaaaagatgcag 500
Query: 301 ttacataatgcacgcattcaacttcacacaattcaactccaggaggtggggactggggca 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 ttacataatgcacgcattcaacttcacacgattcaactccaggaggtggggactggggca 560
Query: 361 gcacagagaaagagacagagaaagagagatagagagacagagagacagagtgagactgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcacagagaaagagacagagaaagagagatagagagacagagagacagagtgagactgtg 620
Query: 421 agatctgccgaccctctactcactgagcacgggaagctgatgaatctcagtccttctcat 480
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 621 agatctgccaaccctctactcactgagcacggcaagctgatgaatctcagtccttctcat 680
Query: 481 ttccagttttccttctaaa 499
|||||||||||||||||||
Sbjct: 681 ttccagttttccttctaaa 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
