Query= MSMg01no338_k02.b1 MSMg01no338_k02.b1 CHROMAT_FILE:
MSMg01no338_k02.b1 PHD_FILE: MSMg01no338_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:18 2005
(484 letters)
>mm_chr7_123500548_123501431
Length = 884
Score = 793 bits (410), Expect = 0.0
Identities = 434/442 (98%), Gaps = 2/442 (0%)
Strand = Plus / Minus
Query: 1 ttaattggaggttcacaaagacagcttaaattgaaccttctttgatagatacaagtttct 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaattggaggttcacaaagatagcttaaattgaaccttctttgatagatacaagtttct 382
Query: 61 gtttgtttaatgatattggtgccttttttaaaaacagtgccatctgttttaattatagac 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 gtttgtttaatgatattggtgcctttttttaaaacagtgccatctgttttaattatagac 322
Query: 121 attttagaagttgtcttaatatttgttaaggcaagtctcccttaatctttttcatagttt 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 attttagaagttgtcttaatatttgttaaggcaagtctctcttaatctttttcatagttt 262
Query: 181 tcttgagtagcctcaaaaatatatttataattgtgctcaaattatattattcagccaggt 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 tcttgagtagcctcaaaaatatatttataattatgctcaaattatattattcagccaggt 202
Query: 241 attgtttttgtttttgttttgttt-tttttttttttttccgaaacagggtttctctatgt 299
|||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||
Sbjct: 201 attgtttttgtttttgttttgtttattttttgtttttt-cgaaacagggtttctctatgt 143
Query: 300 agccctggctgtcctggaacttactctgtagaccaggctggcctggaactcaaaaatccc 359
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 142 agccctggctgtcctggaacttactctgtagaccaggctggcctggaactcagaaatccc 83
Query: 360 cctgcctctgcctcccaagtgctgagattaaaagcatgcaccaccactgcctggcccttt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 cctgcctctgcctcccaagtgctgagattaaaagcatgcaccaccactgcctggcccttt 23
Query: 420 tgtttcttaattaaaggtattt 441
||||||||||||||||||||||
Sbjct: 22 tgtttcttaattaaaggtattt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_k02.g1 MSMg01no338_k02.g1 CHROMAT_FILE:
MSMg01no338_k02.g1 PHD_FILE: MSMg01no338_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:18 2005
(514 letters)
>mm_chr7_123321710_123322623
Length = 914
Score = 971 bits (502), Expect = 0.0
Identities = 511/514 (99%)
Strand = Plus / Plus
Query: 1 tctttgcaatcaaatttcctcaaaacaaaagttcatcaaaaccaaaccaaacaaaaagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttgcaatcaaatttcctcaaaacaaaagttcatcaaaaccaaaccaaacaaaaagac 260
Query: 61 ttggtcacaaggaaaatagtaattttacacaccagttttctccaaggcccaggagaatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggtcacaaggaaaatagtaattttacacaccagttttctccaaggcccaggagaatct 320
Query: 121 cagagttgggtttagctgttaaaccatctttccttggggctggagaaatggctttagtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagagttgggtttagctgttaaaccatctttccttggggctggagaaatggctttagtgg 380
Query: 181 ttaagagcatttgctgctcttgcaggggacctgagttcagttctcagaaccacatggcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaagagcatttgctgctcttgcaggggacctgagttcagttctcagaaccacatggcag 440
Query: 241 ctcacatctgtttgttaacttcagtttcaggggatgaaatgccctcttctggcttccatg 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcacaactgtttgttaacttcagtttcaggggatgaaatgccctcttctggcttccatg 500
Query: 301 ttcaccaggcatgagcagtgaacacatccatacatgcaagcaaaatactcatacacataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcaccaggcatgagcagtgaacacatccatacatgcaagcaaaatactcatacacataa 560
Query: 361 aatatagtctttccctattcagaagttttgacagttaaaacaaaagaacagtttctaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatatagtctttccctattcagaagttttgacagttaaaacaaaagaacagtttctaacc 620
Query: 421 ctgaatacaacatgaggcttgtttgccacctcccacatatcccttccaccaacacacact 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 621 ctgaatacaacatgaggcttgtttgccaccccccacatatcccttccaccaacacacact 680
Query: 481 agagtacccaaaccaaattaagttaatgttgtca 514
| ||||||||||||||||||||||||||||||||
Sbjct: 681 aaagtacccaaaccaaattaagttaatgttgtca 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
