Query= MSMg01no339_m02.b1 MSMg01no339_m02.b1 CHROMAT_FILE:
MSMg01no339_m02.b1 PHD_FILE: MSMg01no339_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:40 2005
(585 letters)
>mm_chr7_6753923_6754906
Length = 984
Score = 1093 bits (565), Expect = 0.0
Identities = 580/585 (99%), Gaps = 2/585 (0%)
Strand = Plus / Plus
Query: 1 tcagttggagggcttgctttgaatgcacaaagtcctgggtgtgattccccccccacacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 202 tcagttggagggcttgctttgaatgcacaaagtcctgggtgtgattccccccc-acacac 260
Query: 61 tgcataaactaggtgtggtgatacatgcctgtaatgcctgaacttgggaggcaagaggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 tgcataaactaggtgtggtgatacatgcctgtaatgcctgaacttgggaggcaggaggat 320
Query: 121 cagaagtccagagtcatcttcagctacacatcatgtctcaaaagaaaaacaaaaaacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaagtccagagtcatcttcagctacacatcatgtctcaaaagaaaaacaaaaaacaaa 380
Query: 181 caaaaatcaaaacaacaacaaaatccagaaacaaaaaataaacaaacaagaaaacagcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaaaatcaaaacaacaacaaaatccagaaacaaaaaataaacaaacaagaaaacagcaa 440
Query: 241 caagaacaacaaaaaggaacatgatgcttctaaagaaaattgggaaactgttcaaatttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagaacaacaaaaaggaacatgatgcttctaaagaaaattgggaaactgttcaaatttt 500
Query: 301 ccaagcaaggccatggaatgtccgggtgttccctgataaattcggagcccctgagcactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccaagcaaggccatggaatgtccgggtgttccctgataaattcggagcccctgagcactc 560
Query: 361 ctaactacagcactgagagggtaactgggtggttaaattgcttgtcatgcaagcttcagg 420
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctaactacagcactgagagg-tgactgggtggttaaattgcttgtcatgcaagcttcagg 619
Query: 421 accaaagttcagataaatggaattccagccttggagttgcaagcaagagatccctgaagc 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 accaaagttcaaataaatggaattccagccttggagttgcaagcaagagatccctgaagc 679
Query: 481 aagatgactagctagaagagccgtgctggcgggctctgagtttgcttgccagaccctgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aagatgactagctagaagagccgtgctggcgggctctgagtttgcttgccagaccctgtc 739
Query: 541 ttgatgagaaagttgtcagagcaatggaggattgctgacatcaat 585
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttgatgagaaagttgtcagagcaatggaggattgctgacatcaat 784
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 984
Length adjustment: 10
Effective length of query: 575
Effective length of database: 974
Effective search space: 560050
Effective search space used: 560050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_m02.g1 MSMg01no339_m02.g1 CHROMAT_FILE:
MSMg01no339_m02.g1 PHD_FILE: MSMg01no339_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:40 2005
(529 letters)
>mm_chr7_12055847_12056775
Length = 929
Score = 810 bits (419), Expect = 0.0
Identities = 503/531 (94%), Gaps = 5/531 (0%)
Strand = Plus / Plus
Query: 1 actatgaagcccgtgtcttgtcatgtacccaatggacaccctgggctgtgcaaagtagac 60
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 actatgaagcccatgtcttgtcatgtacccaatggacaccctgggctgtgtaaagtagac 260
Query: 61 tggcctcaagcagtacatctttgtgagatagttttacataatgtgcattcaaatgctgat 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcctcaagcagtacatctttgtgggatagttttacataatgtgcattcaaatgctgat 320
Query: 121 ttctgtgcaaggacacctaattgctattggatgttggcagtgtcataattgttgaatcat 180
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 321 ttctgtgcaaggacacctaattgctattggctgttggcagtgtcataattgttgaagcat 380
Query: 181 ctcctgtctcaatgttgtgtaaaaattgttctccatcacctctgattggctaaatgtgga 240
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 ctcctgtctcaaggttgtgtaaaaattattctccatcacctctgattggctaaatgtgga 440
Query: 241 gagcttttgaggttgcttctaggaaggtcaacctgataaatccctagacacag-tgacaa 299
||||||||||||||||||||||||||||||||||||| || ||||||||| || ||| ||
Sbjct: 441 gagcttttgaggttgcttctaggaaggtcaacctgatcaacccctagaca-aggtgagaa 499
Query: 300 tgggactttgtttattgcctgtttgattactttgattattgtctggtttgttccttattt 359
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 500 tgggactttgtttattgtctgtttgattactttgattattgtctagtttgttccttattt 559
Query: 360 acgctttgttttttccttaactattttgtttatgccttaggactggccata-gactttgt 418
| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 560 atgctttgttttttccttaactattttgtttatgccttaggactggccatatg-ctttgt 618
Query: 419 atgaacctagagtggtataaaagcacactggaaaacaaataaacaggccttcagcttcag 478
|| ||||||| ||||||||||||| | |||||| |||||||||||||||||| |||||
Sbjct: 619 gtgtacctagaatggtataaaagcagaaaggaaaa-aaataaacaggccttcaggttcag 677
Query: 479 aactggctggggtcatgttacagtgtcgtccaattgtctttttcttatcaa 529
|||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 678 aactggctggggtcatgttacagtgttatctaattgtctttttcttatcaa 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
