Query= MSMg01no339_o12.b1 MSMg01no339_o12.b1 CHROMAT_FILE:
MSMg01no339_o12.b1 PHD_FILE: MSMg01no339_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:51 2005
(526 letters)
>mm_chr7_99298484_99299409
Length = 926
Score = 922 bits (477), Expect = 0.0
Identities = 510/521 (97%)
Strand = Plus / Plus
Query: 5 tgtgtaaataaataaaggtcaccccactaagggaaagttaagatatggtctctgccaaac 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 205 tgtgtaaataaataaaggtcaccccactaagggaaagttaagatatggtctctgtcaaac 264
Query: 65 atcaggaagcgcgctagacattatcaatactatgataatttattaaaacatcttaagaag 124
|||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 265 atcaggaagctcgctagacattatccatgctatgataatttattaaaacatcttaagaag 324
Query: 125 cttcaagacttcctttctaatttcctatttgtgtcactatctgggacaaagctggactga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttcaagacttcctttctaatttcctatttgtgtcactatctgggacaaagctggactga 384
Query: 185 gctggtaactccaaatttgggttctgggtgtccatagtcttctctagaaaaggccagcac 244
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 385 gctggtaactccaaatttgggttctgggtgttcatggtcttctctagaaaaggccagcac 444
Query: 245 aatggttggtccacagtggttggtccacattagctactggcataatgcttactgcagaga 304
||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 445 aatggttggtccacaatggttgatccacattagctactggcataatgtttactgcagaga 504
Query: 305 acgccatcggtttaaaaccactctgaggacagaacacaaagggtccatccaccattccat 364
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgccatcggtttaaaaccactctgaggacagaacacaaagggtccatccaccattccat 564
Query: 365 gattttgtaccaacaggaactgctctagagaataagtgagatctcatagaagcatcgagg 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 565 gattttgtaccaacaggaactgctctagagaataagtgagatctcatagaagcagcgagg 624
Query: 425 gtgacagacagtagcatgagtgaatatattgaacggagagaactcacactaaattgaagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtgacagacagtagcatgagtgaatatattgaacggagagaactcacactaaattgaagt 684
Query: 485 cccacaaccaaaaatcattaggaacagtgggacagcaaaca 525
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cccacaaccaaaaatcattaggaacagtgggacagcaaaca 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_o12.g1 MSMg01no339_o12.g1 CHROMAT_FILE:
MSMg01no339_o12.g1 PHD_FILE: MSMg01no339_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:51 2005
(484 letters)
>mm_chr7_99511693_99512577
Length = 885
Score = 899 bits (465), Expect = 0.0
Identities = 480/485 (98%), Gaps = 1/485 (0%)
Strand = Plus / Minus
Query: 1 ctaaaatatggaaaaaagaaatccaagaacatttgatatgaatgctccaaatccctagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctaaaatatggaaaaaagaaatccaagaacatttgatatgaatgctccaaatccctagtt 626
Query: 61 ccaaattgtagtggcagcttttggaataagtgacaaaatgtccataactcacaacgttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccaaattgtagtggcagcttttggaataagtgacaaaatgtccataactcacaacgttag 566
Query: 121 tttgctgggcaacctttcgactttcctaggtattgggtttgttacacttattagtca-tt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 565 tttgctgggcaacctttcgactttcctaggtattgggtttgttacacttattagtcattt 506
Query: 180 tttttttcacctctagaaaaccagatgggagacacatgctccagtgtgacgtgggaagcc 239
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 505 tttttttcacctctagaaaaccagatgggagacacaggctccagtgtgacgtgggaagcc 446
Query: 240 ctggagttagacaaccttcacctccacacctcccatgtgattctcaggtttctgtcatca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctggagttagacaaccttcacctccacacctcccatgtgattctcaggtttctgtcatca 386
Query: 300 cctaatgaacagggcagacagaggggacaggctgcttctatactcccccaggtgagcata 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 385 cctaatgaacagggcagacagaggggacaggctgcttctatactcccccaggtgagcaca 326
Query: 360 ctgaccttgaaacataagcaagattccatgaatgaaaacaagaacactcatttgaatatt 419
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 325 ctgaccttgaaacataagcaagattccatgaatgaaaacaaaaacactcatttgaatatt 266
Query: 420 aagtggaacattatttagaatatatctcctaagtactttaggcactgctggcttttctga 479
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagtggagcattatttagaatatatctcctaagtactttaggcactgctggcttttctga 206
Query: 480 gaatt 484
|||||
Sbjct: 205 gaatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 885
Length adjustment: 10
Effective length of query: 474
Effective length of database: 875
Effective search space: 414750
Effective search space used: 414750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
