Query= MSMg01no341_k15.b1 MSMg01no341_k15.b1 CHROMAT_FILE:
MSMg01no341_k15.b1 PHD_FILE: MSMg01no341_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:58 2005
(244 letters)
>mm_chr7_103412550_103413194
Length = 645
Score = 458 bits (237), Expect = e-133
Identities = 243/245 (99%), Gaps = 1/245 (0%)
Strand = Plus / Plus
Query: 1 gtgacttacggttcatagaagaaaccctgactaggaggatttgaactcaggctcctgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgacttacggttcatagaagaaaccctgactaggaggatttgaactcaggctcctgaaa 260
Query: 61 gctcatgcctgtgcacatcatattttgagttcaattgtcccggtcctacgcagtgtagtc 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 gctcatgcctgtgcacatcatatttggagttcaattgtcccggtcctacgcagtgtagtc 320
Query: 121 aggagtcccatggattcctgagtccccatctcaagtgtatggctgatagggttctaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggagtcccatggattcctgagtccccatctcaagtgtatggctgatagggttctaccag 380
Query: 181 ataaatcagtaggatgagaaaatgttatctttattctggtagagaaggttttcttggtc- 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataaatcagtaggatgagaaaatgttatctttattctggtagagaaggttttcttggtcg 440
Query: 240 cacag 244
|||||
Sbjct: 441 cacag 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space: 149460
Effective search space used: 149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no341_k15.g1 MSMg01no341_k15.g1 CHROMAT_FILE:
MSMg01no341_k15.g1 PHD_FILE: MSMg01no341_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:59 2005
(373 letters)
>mm_chr7_103583343_103584115
Length = 773
Score = 683 bits (353), Expect = 0.0
Identities = 368/373 (98%)
Strand = Plus / Minus
Query: 1 aaagcctatgaatttgactcatcagcacccactgctatccttacacaataaattgtcaaa 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 573 aaagcctatgaatttgactcatcagcacccactgttatccttacacaataaattgtcaaa 514
Query: 61 tgagtgcaagaaattacaccccattgataaagaagggaggggctgcaatgttttaagtca 120
|||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 513 tgagtgcaaggaattacaccccactgataaagaagggaggggctgtaatgttttaagtca 454
Query: 121 tttgccttgggtgatttcagcaaaaggaattggaatctgagcacagaccctggagaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tttgccttgggtgatttcagcaaaaggaattggaatctgagcacagaccctggagaactg 394
Query: 181 gaggtccatgcactataacagacactctggagcaccctctgcagaaagagctttcaggca 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 caggtccatgcactataacagacactctggagcaccctctgcagaaagagctttcaggca 334
Query: 241 aagagctgggtgtcaagacacttaatttatctgagttttgttcccaagccattatttgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aagagctgggtgtcaagacacttaatttatctgagttttgttcccaagccattatttgag 274
Query: 301 aagttccctgaatacatatttgccaaatataccttggaaccctgctaagaagtcattatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aagttccctgaatacatatttgccaaatataccttggaaccctgctaagaagtcattatt 214
Query: 361 gtctcttataagg 373
|||||||||||||
Sbjct: 213 gtctcttataagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
