Query= MSMg01no342_j03.b1 MSMg01no342_j03.b1 CHROMAT_FILE:
MSMg01no342_j03.b1 PHD_FILE: MSMg01no342_j03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:07 2005
(537 letters)
>mm_chr7_140055877_140056813
Length = 937
Score = 1000 bits (517), Expect = 0.0
Identities = 520/521 (99%)
Strand = Plus / Plus
Query: 17 gaattctatgtttactgcgttaataggtgttctccacaagtgtaaataaactttgcgttt 76
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaattctatgttgactgcgttaataggtgttctccacaagtgtaaataaactttgcgttt 276
Query: 77 attagatgggagctagtatgttggctgaaatcttgatttcccattccagtttatcctgcc 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 attagatgggagctagtatgttggctgaaatcttgatttcccattccagtttatcctgcc 336
Query: 137 attgtctgtattgttcactattagtggtggttttaaagcaataaaggaagttatatgaag 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 attgtctgtattgttcactattagtggtggttttaaagcaataaaggaagttatatgaag 396
Query: 197 tcataacttcatataagcaacatgaagttatatgtgacattatataagcaaccatggcat 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tcataacttcatataagcaacatgaagttatatgtgacattatataagcaaccatggcat 456
Query: 257 atttctgcttcttgtgattgtttaagcatgctgtgggactgtctaggatttaagtaatga 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 atttctgcttcttgtgattgtttaagcatgctgtgggactgtctaggatttaagtaatga 516
Query: 317 actcatttaaaacaggaagacttgttgatttacaatgatgtgtcattttggaatattttc 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 actcatttaaaacaggaagacttgttgatttacaatgatgtgtcattttggaatattttc 576
Query: 377 ttacatgtgatcctattaatagatgacaccagcttgctgtggtccagtcactggtttata 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ttacatgtgatcctattaatagatgacaccagcttgctgtggtccagtcactggtttata 636
Query: 437 aaaaagcactttacatgccaagcttatttggattattgttaaaattaatataaaatagta 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 aaaaagcactttacatgccaagcttatttggattattgttaaaattaatataaaatagta 696
Query: 497 catcctaatttccttttagttttaataaaaattatctttaa 537
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 catcctaatttccttttagttttaataaaaattatctttaa 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_j03.g1 MSMg01no342_j03.g1 CHROMAT_FILE:
MSMg01no342_j03.g1 PHD_FILE: MSMg01no342_j03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:07 2005
(426 letters)
>mm_chr7_140216388_140217215
Length = 828
Score = 793 bits (410), Expect = 0.0
Identities = 423/428 (98%), Gaps = 2/428 (0%)
Strand = Plus / Minus
Query: 1 caagatatttccgaggaacccactctagccctcttgatgttttcaagtcttcagtatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 caagatatttccgaggaacccactctagccctcttgatgttttcaagtcttcagtatttt 569
Query: 61 tgaaaatgtctggaagtgttttattcatgaaaggaaaaaataaacataattaaaatctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tgaaaatgtctggaagtgttttattcatgaaaggaaaaaataaacataattaaaatctaa 509
Query: 121 tggaaacccggggataaaactctgaaacattgattaagcgctgtcctttcctaattagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tggaaacccggggataaaactctgaaacattgattaagcgctgtcctttcctaattagtg 449
Query: 181 aggagcaaggaccgccaaacctgcaactcggggtttatacgggctgtgccagcctgcagt 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aggagcaaggcccgccaaacctgcaactcggggtttatacgggctgtgccagcctgcagt 389
Query: 241 cagtgctgcaggactagccttgtctaggagtgttttcaaggctagcttggctcttggtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cagtgctgcaggactagccttgtctaggagtgttttcaaggctagcttggctcttggtat 329
Query: 301 gttaggtgtattccagcctgtagcagagggcacacaggctaagctgccacaccagctctc 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 328 gttaggtgtattccagcctgtagcagagggcacacaggcaaagctgccacaccagctctc 269
Query: 361 aggcaggccacacaccccc--acaacttcccctgcagccacccatatggaattgcttgtc 418
||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aggcaggccacacccccccccacaacttcccctgcagccacccatatggaattgcttgtc 209
Query: 419 ctttaaat 426
||||||||
Sbjct: 208 ctttaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 828
Length adjustment: 9
Effective length of query: 417
Effective length of database: 819
Effective search space: 341523
Effective search space used: 341523
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
