Query= MSMg01no343_c04.b1 MSMg01no343_c04.b1 CHROMAT_FILE:
MSMg01no343_c04.b1 PHD_FILE: MSMg01no343_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:51 2005
(370 letters)
>mm_chr7_99617597_99618365
Length = 769
Score = 669 bits (346), Expect = 0.0
Identities = 364/370 (98%), Gaps = 1/370 (0%)
Strand = Plus / Minus
Query: 1 ctacgcttgcaacaacacctcctgtctgcctttgcccaattcagaggcagcccccacccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctacgcttgcaacaacacctcctgtctgcctttgcccaattcagaggcagcccccacccc 625
Query: 61 tgattctttacctgggtaatatctcctttgtgctgagaacttggtgtctgggtgtgttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgattctttacctgggtaatatctcctttgtgctgagaacttggtgtctgggtgtgttct 565
Query: 121 ctacagactctactagctccttccattgatctgcaaatttcttgatgtcatttttgtatg 180
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 564 ctacagactctactagctccatccatttatctgcaaatttcttgatgtcatttttgtatg 505
Query: 181 aaatattgaatttattgacctttgggggaataagatgcatgtcattgtattataacctag 240
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaatattgaatttattgatctgtgggggaataagatgcatgtcattgtattataacctag 445
Query: 241 cattagtcttgttgcttcatcaacattagctggttcattttcatggcacagctctttctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cattagtcttgttgcttcatcaacattagctggttcattttcatggcacagctctttctg 385
Query: 301 ctcagatttaagagaaaggttttctgaaaagcttacaatcctttctgtatatttacaacg 360
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 384 ctcagatttaag-gaaaggttttctgaaaagcttacaatcctttctgtatatttacaatg 326
Query: 361 gctctgttca 370
||||||||||
Sbjct: 325 gctctgttca 316
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 769
Length adjustment: 9
Effective length of query: 361
Effective length of database: 760
Effective search space: 274360
Effective search space used: 274360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_c04.g1 MSMg01no343_c04.g1 CHROMAT_FILE:
MSMg01no343_c04.g1 PHD_FILE: MSMg01no343_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:51 2005
(251 letters)
>mm_chr7_99432320_99432970
Length = 651
Score = 464 bits (240), Expect = e-135
Identities = 249/252 (98%), Gaps = 2/252 (0%)
Strand = Plus / Plus
Query: 1 ccccatgagacat-gcgcttgtcctaagaagctcagcctagtggaatagggtaaccacac 59
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccccatgagacatag-gcttgtcctaagaagctcagcctagtggaatagggtaaccacac 259
Query: 60 aagtaattgcaaggtgctgtgagagagcatctgatgagcaatggggtaatagagtcagtg 119
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 260 aagtaattgcaaggtgctgtgagagagcatctaatgagcaatggggtaatagagtcagtg 319
Query: 120 ctgtgattggtagatgcagtgctgtgattggtagaggcggtgttgtaataaaggcagtaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctgtgattggtagatgcagtgctgtgattggtagaggcggtgttgtaataaaggcagtaa 379
Query: 180 tgtagctcactggagagacagggtaaagcgctgattatagatgctttttcaactttcaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtagctcactggagagacagggtaaagcgctgattatagatgctttttcaactttcaag 439
Query: 240 tctttctggttg 251
||||||||||||
Sbjct: 440 tctttctggttg 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
