Query= MSMg01no343_m20.b1 MSMg01no343_m20.b1 CHROMAT_FILE:
MSMg01no343_m20.b1 PHD_FILE: MSMg01no343_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:46 2005
(382 letters)
>mm_chr7_73838014_73838795
Length = 782
Score = 683 bits (353), Expect = 0.0
Identities = 368/373 (98%)
Strand = Plus / Minus
Query: 8 gaattcataagaggatatctggtagctagtactgaggatgacactgatgatttaaaagct 67
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 524 gaattcataagaggataactggtagctggtactgaggatgacactgatgatttaaaagct 465
Query: 68 ttggaaaatatgtggaatcctcccaaattgtttgttgcaaggttttctgtttgcttgttg 127
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ttggaaaatatgtggaatccttccaaattgtttgttgcaaggttttctgtttgcttgttg 405
Query: 128 ttagattctgaacctgcttgcagagtcacacctattcctctgaatatgcagttacagagt 187
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 404 ttagattctgaacctgcttgcagagtcacacctattcctctgaatatgcagttatagagt 345
Query: 188 gctaggttctacatatatttgatctaaattaatagccagaagtgtctggaaacttcttgt 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gctaggttctacatatatttgatctaaattaatagccagaagtgtctggaaacttcttgt 285
Query: 248 agaacaacctgcttcttagggaaactaaacttgcatattttctaatctaagtaaacagtt 307
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 284 agaacaacctgcttcttagggaaactaaacttgcgtattttctaatctaagtaaacagtt 225
Query: 308 attaaagacgttctcctggctgacaagatggctcagtgggtaaaggagcctgctgccaag 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 attaaagacgttctcctggctgacaagatggctcagtgggtaaaggagcctgctgccaag 165
Query: 368 cctggcggcctga 380
|||||||||||||
Sbjct: 164 cctggcggcctga 152
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_m20.g1 MSMg01no343_m20.g1 CHROMAT_FILE:
MSMg01no343_m20.g1 PHD_FILE: MSMg01no343_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:46 2005
(362 letters)
>mm_chr7_73718415_73719177
Length = 763
Score = 650 bits (336), Expect = 0.0
Identities = 356/363 (98%), Gaps = 1/363 (0%)
Strand = Plus / Plus
Query: 1 agttagccagattcgggatgatgaccatagcacctgaagtccaccatacccagtggccag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 agttagccagattcgggatgatgaccatagcacctgaagtccaccatacccactggccag 260
Query: 61 ggactgctatgagaaacctactcacggaaattggttaaatgtggaagacagaggaac-cg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 ggactgctatgagaaacctactcacggaaattggttaaatgtggaagacagaggaacggg 320
Query: 120 gggaatgctctgtcagggacatccaggacaacacagagaggagagaagggagaaggggaa 179
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 gggaatgttctgtcagggacatccaggacgacacagagaggagagaagggagaaggggaa 380
Query: 180 ggagctccggtgtgacagatccagctcttgccagccacagtggcccactgctaaaggcaa 239
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 ggagctccggtgtgacagatccagctcctgccagccacagtggcccactgctaaaggcaa 440
Query: 240 ctctgtgagcctctcgctaaattattgatacggaaaggtcagccatggaagtatttacac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctgtgagcctctcgctaaattattgatacggaaaggtcagccatggaagtatttacac 500
Query: 300 cacagaaactgctaaatgccacagctcaggactctgtgttttgtttggntttgaagagtc 359
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 cacagaaactgctaaatgccacagctcaggactctgtgttttgtttggttttgaagagtc 560
Query: 360 aat 362
|||
Sbjct: 561 aat 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 763
Length adjustment: 9
Effective length of query: 353
Effective length of database: 754
Effective search space: 266162
Effective search space used: 266162
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
