Query= MSMg01no344_n21.b1 MSMg01no344_n21.b1 CHROMAT_FILE:
MSMg01no344_n21.b1 PHD_FILE: MSMg01no344_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:11 2005
(376 letters)
>mm_chr7_91580058_91580835
Length = 778
Score = 673 bits (348), Expect = 0.0
Identities = 370/378 (97%), Gaps = 2/378 (0%)
Strand = Plus / Minus
Query: 1 attgtgcttagagctggagcttgctgtctgctctagcttgtagtctaacatggtgaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 attgtgcttagagctggagcttgctgtctgctctagcttgtagtctaacatggtgaagag 684
Query: 61 gtggatattttgattcttctttcctcatctacaagatggggttaataaaacttattcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtggatattttgattcttctttcctcatctacaagatggggttaataaaacttattcata 624
Query: 121 aagctggccaaaggataaagtgaagtaaaggatgttaaagcccttttattcaatgcaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 623 aagctggccaaaggataaagtgaagtaaaggatgttaaagcccttttattcaatgaaatg 564
Query: 181 atacactatttgaattatgatcgag--ttttttatcctggggtaaatttaaaagtggtta 238
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 563 atacactatttgaattatgatcgagttttttttatcctggggtaaatttaaaagtggcta 504
Query: 239 ggcagcagtgcatgagtcgcacaataagagcttgctgaatgtgccaggcactgctgctgg 298
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggcagcagtgcaagagtctcacaataagagcttgctgaatgtgccaggcactgctgctgg 444
Query: 299 cttatctatggatcctataagcacgttctaatcccttgctgtgtgttagaaatatatgca 358
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 443 cttatctatggatcctataagcatgttctaatcccttgctgtgtgttagaaatatatgca 384
Query: 359 gaaattgaaggtcctggc 376
|||||||||||| |||||
Sbjct: 383 gaaattgaaggtactggc 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 778
Length adjustment: 9
Effective length of query: 367
Effective length of database: 769
Effective search space: 282223
Effective search space used: 282223
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_n21.g1 MSMg01no344_n21.g1 CHROMAT_FILE:
MSMg01no344_n21.g1 PHD_FILE: MSMg01no344_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:11 2005
(420 letters)
>mm_chr7_91429493_91430311
Length = 819
Score = 775 bits (401), Expect = 0.0
Identities = 413/417 (99%), Gaps = 1/417 (0%)
Strand = Plus / Plus
Query: 4 cccccctttccaggcctgaggagtccacaggcctcattcttaattagctctaactcacca 63
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cccccc-ttccaggcctgaggagtccacaggcctcattcttaattagctctaactcacca 262
Query: 64 aagtgtgacactttgtcctttgcttcaagactctcctgtcccctgtgctcaccataggag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aagtgtgacactttgtcctttgcttcaagactctcctgtcccctgtgctcaccataggag 322
Query: 124 gcaacagtgacttgtgacaggtgcctgtccaaaagtgtgtgcactattatggtggccatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gcaacagtgacttgtgacaggtgcctgtccaaaagtgtgtgcactattatggtggccatt 382
Query: 184 ctgccaggctgcctctacctcactgttcctgtctgaattattctctccttaagttacttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctgccaggctgcctctacctcactgttcctgtctgaattattctctccttaagttacttc 442
Query: 244 ccatatctaattcccataggccctgcacagctctggagaccatcgctcattttcaaggtc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ccatatctaattcccataggccctgcacagctctggagaccatcgctcattttcaaggtc 502
Query: 304 ttctgacttacccttgttttcatttatttgcatacctggcccccccaagtggctcttcaa 363
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 503 ttctgacttacccttgttttcatttatttgcatacctgggcttcccaagtggctcttcaa 562
Query: 364 agcatcatttgccttatgtgctcaaacgaattgctactcacgttcatggatcctggg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agcatcatttgccttatgtgctcaaacgaattgctactcacgttcatggatcctggg 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 819
Length adjustment: 9
Effective length of query: 411
Effective length of database: 810
Effective search space: 332910
Effective search space used: 332910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
