Query= MSMg01no345_g01.b1 MSMg01no345_g01.b1 CHROMAT_FILE:
MSMg01no345_g01.b1 PHD_FILE: MSMg01no345_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:49 2005
(455 letters)
>mm_chr7_6588285_6589135
Length = 851
Score = 799 bits (413), Expect = 0.0
Identities = 443/455 (97%), Gaps = 4/455 (0%)
Strand = Plus / Plus
Query: 1 ctgatgaaattaggacaataaattctgagcccagtggctgtgtcatctggttgattataa 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 ctgatgaaattaggacaataaattctgtgcccagtggctgtgtcatctggttgattataa 260
Query: 61 atattaagattgtctggtgttttccatttgccgtgattcaggtaggcaagttgagagggt 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 atattaagattgtctggtgtttcccatttgccgtgattcaggtaggcaagttgagagggt 320
Query: 121 gcagccacatggtagccatctgctgaacctgccaagggactggatggctggtggaaagtg 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaaccacatggtagccatctgctgaacctgccaagggactggatggctggtggaaagtg 380
Query: 181 aatgctagttccaggcattctcaggagggacacctgccaggtggcttagcaaagctagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgctagttccaggcattctcaggagggacacctgccaggtggcttagcaaagctagct 440
Query: 241 agaagaatggacaatagtcatggtctcaggtggctggctgcactgggcaaggaacagaca 300
|||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 agaagaatggacaacagtcatggtctcaggtggctg----cactgggcaaggaacagaca 496
Query: 301 gagactcgagtggcttggtgaagctacccttgggggctggaagagaccaatgttgcttgc 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 497 gagactcgagtggcttggtgaagctacccttcggggctggaagagaccaatgttgctggc 556
Query: 361 atatagccagagtagtgtgggtttatttaaaattacaggatacatctgctgacccggttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 557 atatagccagagtagtgtgggtttatttaaaattacaggatacatctgctggcccagttc 616
Query: 421 tgttgtgtagcaagtaaagctttctgttatttggc 455
|||||||||||||||||||||||||||||||||||
Sbjct: 617 tgttgtgtagcaagtaaagctttctgttatttggc 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 851
Length adjustment: 10
Effective length of query: 445
Effective length of database: 841
Effective search space: 374245
Effective search space used: 374245
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_g01.g1 MSMg01no345_g01.g1 CHROMAT_FILE:
MSMg01no345_g01.g1 PHD_FILE: MSMg01no345_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:49 2005
(315 letters)
>mm_chr7_6749045_6749759
Length = 715
Score = 594 bits (307), Expect = e-174
Identities = 313/315 (99%)
Strand = Plus / Minus
Query: 1 accaaaattggtggggaaatatgggcgttgtgggagctgagcaaggagggatgcgccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 accaaaattggtggggaaatatgggcgttgtgggagctgagcaaggagggatgcgccaag 292
Query: 61 gtagcctgagtatgtcatgtcttttcaactcttgacttgatgactctgctaaaataaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gtagcctgagtatgtcatgtcttttcaactcttgacttgatgactctgctaaaataaatg 232
Query: 121 cacatttgctctggattaaaatggacagtttggtgctgggggtgtagttcagttggtgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 cacatttgctctggattaaaatggacagtttggtgctgggggtgtagttcagttggtgga 172
Query: 181 ccactggcctaaccttcgcaaagccctgggtttgacctccagcaccagataaactgagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ccactggcctaaccttcgcaaagccctgggtttgacctccagcaccagataaactgagta 112
Query: 241 tactggtgtatatctgtgactccagcatcctggagctggaggccagaggatcagaaggtt 300
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 tactggtggacatctgtgactccagcatcctggagctggaggccagaggatcagaaggtt 52
Query: 301 ggagtcatccttggc 315
|||||||||||||||
Sbjct: 51 ggagtcatccttggc 37
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
