Query= MSMg01no345_m01.b1 MSMg01no345_m01.b1 CHROMAT_FILE:
MSMg01no345_m01.b1 PHD_FILE: MSMg01no345_m01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:16 2005
(649 letters)
>mm_chr7_89494533_89495581
Length = 1049
Score = 1247 bits (645), Expect = 0.0
Identities = 648/649 (99%)
Strand = Plus / Minus
Query: 1 tcacataccctaacccgaacccgaacctgaacccaaaccctagtcactgctagtgacagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 tcacataccctaacccgaacccgaacctgaacccaaaccctagtcactgctagtgacagg 830
Query: 61 tggttctcttacaaccaagtagtggcctgtcaaaatcaggagctgtcctagaatcccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 tggttctcttacaaccaagtagtggcctgtcaaaatcaggagctgtcctagaatcccctt 770
Query: 121 accagctgttgatcatggcacatacatgtgtaaacacagaacagcatcaattaatgaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 accagctgttgatcatggcacatacatgtgtaaacacagaacagcatcaattaatgaaca 710
Query: 181 caatgacaacagagtccaagtgcataccttgattaactggtcagggcttaaccatttttt 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 709 caatgacaacagagtccaagtgcatgccttgattaactggtcagggcttaaccatttttt 650
Query: 241 ttttcatgaaatcatttggactggaaccaaatagaattgaaaagaacagtaaatatcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ttttcatgaaatcatttggactggaaccaaatagaattgaaaagaacagtaaatatcatg 590
Query: 301 gtaaattttataaaaatgatagtctttttttctgaaacacttcaagtaatacgaaaaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gtaaattttataaaaatgatagtctttttttctgaaacacttcaagtaatacgaaaaatt 530
Query: 361 atttatttagtcctgaggtcacaggcattgccttgccctgggtgatagtgaacagtctaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 atttatttagtcctgaggtcacaggcattgccttgccctgggtgatagtgaacagtctaa 470
Query: 421 gtgagcagcacattggtttaagatcagcactgggctcacatgtgagacaggagaaagaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gtgagcagcacattggtttaagatcagcactgggctcacatgtgagacaggagaaagaac 410
Query: 481 caaagcttccacattattgtatggcaatcagtctcaggaactaaagctaaggtggatcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 caaagcttccacattattgtatggcaatcagtctcaggaactaaagctaaggtggatcac 350
Query: 541 aaagtgagccctacctataactgttgtctactctttccaaacccagaagtgatttctgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aaagtgagccctacctataactgttgtctactctttccaaacccagaagtgatttctgat 290
Query: 601 agtcttgaaaatgtagtcattaaatgatgctccctagctgggcagtggt 649
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 agtcttgaaaatgtagtcattaaatgatgctccctagctgggcagtggt 241
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_m01.g1 MSMg01no345_m01.g1 CHROMAT_FILE:
MSMg01no345_m01.g1 PHD_FILE: MSMg01no345_m01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:16 2005
(526 letters)
>mm_chr7_89267519_89268443
Length = 925
Score = 940 bits (486), Expect = 0.0
Identities = 514/525 (97%), Gaps = 4/525 (0%)
Strand = Plus / Plus
Query: 1 attatgtagagaggctggcctagaattcaccgagattctcctgcttctgcctcccaagtg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 attatgtagagaggctggcctagaattcaccgagattctcctgcctctgcctcccaagtg 260
Query: 61 ctgtgactcatcgttctttatcctcaccctcttatttaccattttttccttctttaaatg 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 ctgtgactcatcgttctttatcctcaccctcttatttaccattttt-ccttctttaaatg 319
Query: 121 agcatgtaacaccagagtgattaaaactgtacacacacacgtgtatgtgtgtgtgtgtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agcatgtaacaccagagtgattaaaactgtacacacacacgtgtatgtgtgtgtgtgtat 379
Query: 181 ctcatgagttacacttaggattattcaaatactttgatgtgctaatttacacctcagagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctcatgagttacacttaggattattcaaatactttgatgtgctaatttacacctcagagt 439
Query: 241 tcagcctaaagaactatacctggtatataaaagtagtattaaaaacatgtttaaaagaca 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcagcctaaggaactatacctggtatataaaagtagtattaaaaacatgtttaaaagaca 499
Query: 301 gacagtattacttaagttatggacattttggagtgggctccttagttgtgtattaatagg 360
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 500 gacagtattacttaagttatggacattttggagtgggcttcttagctgtgtattaatagg 559
Query: 361 gaatggcttaatgtaatttgttgtgtagatgtaattgctttgttaggttgtcatgaaaat 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gaatgacttaatgtaatttgttgtgtagatgtaattgctttgttaggttgtcatgaaaat 619
Query: 421 aatgtggaccttccagacatagaaaatgagcattaattanaagaagaaagagaggaggag 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 620 aatgtggaccttccagacatagaaaatgagcattaattagaagaagaaagagaggaggag 679
Query: 481 gaggaggaggagggagaggaaaaagaggaagaagaggaggaaagc 525
|||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 680 gaggaggagg---gagaggaagaagaggaagaagaggaggaaagc 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 925
Length adjustment: 10
Effective length of query: 516
Effective length of database: 915
Effective search space: 472140
Effective search space used: 472140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
