Query= MSMg01no346_g10.b1 MSMg01no346_g10.b1 CHROMAT_FILE:
MSMg01no346_g10.b1 PHD_FILE: MSMg01no346_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:05 2005
(394 letters)
>mm_chr7_137791755_137792548
Length = 794
Score = 725 bits (375), Expect = 0.0
Identities = 388/393 (98%), Gaps = 4/393 (1%)
Strand = Plus / Minus
Query: 5 gaattcctgtgaccttggcagagtcctccacttaggccactactgctacttggagtagca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gaattcctgtgaccttggcagagtcctccacttaggccactactgctacttggagtagca 389
Query: 65 attcccgattcccggttgttcaggcctgtcccatgcaaagtgcccttgacccacacccac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 attcccgattcccggttgttcaggcctgtcccatgcaaagtgcccttgacccacacccac 329
Query: 125 ca-gatgcctatagtgcacttggtcaccaaggcaaccagaaatacccttctgtgtttcta 183
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 catg-tgcctatagtgcacttggtcaccaaggcaaccagaaatacccttctgtgtttcta 270
Query: 184 gatattccttccaaggggtgctgacccctatcaaagtctgcccatcagatacagatgcac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gatattccttccaaggggtgctgacccctatcaaagtctgcccatcagatacagatgcac 210
Query: 244 ctgtg--ctctctctctctctctctctctctctctctctctctctctctctctctctgtc 301
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ctgtgctctctctctctctctctctctctctctctctctctctctctctctctctctgtc 150
Query: 302 acacgcatgcacacacacacatgaccttacagtcttgaagtcattcaactgccaccaacc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 acacgcatgcacacacacacatgaccttacagtcttgaagtcattcaactgccaccaacc 90
Query: 362 accccccctccagaaccctgccagtttttatgg 394
|||||| ||||||||||||||||||||||||||
Sbjct: 89 accccctctccagaaccctgccagtttttatgg 57
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space: 302225
Effective search space used: 302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_g10.g1 MSMg01no346_g10.g1 CHROMAT_FILE:
MSMg01no346_g10.g1 PHD_FILE: MSMg01no346_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:05 2005
(476 letters)
>mm_chr7_137599240_137600115
Length = 876
Score = 905 bits (468), Expect = 0.0
Identities = 474/476 (99%)
Strand = Plus / Plus
Query: 1 caggggtttgtctgcccacagtccagctgaggcagtcagtaagagaaggactgctcaaag 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 caggggtttgtctgcccacagtccagctgaggcagtcagtaagagaagaactgctcaaag 260
Query: 61 atgaattagccctttgtttcttttctgctatttcagaaccttttctggtgtttccactga 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 atgaattagccctttgtttcttttctgctatttcagaaccctttctggtgtttccactga 320
Query: 121 tgtctggccatgtcatgacaccaaagaggactgcttgaaatcactgtttactctggcctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtctggccatgtcatgacaccaaagaggactgcttgaaatcactgtttactctggcctg 380
Query: 181 cgtacaggtctgctgaagaacttcatcaaaacacccctttcagaatacacaacagcctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgtacaggtctgctgaagaacttcatcaaaacacccctttcagaatacacaacagcctct 440
Query: 241 cagcagcaccaagagagaacactgagcaaaatatgttaagttatacctagcttcagaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagcagcaccaagagagaacactgagcaaaatatgttaagttatacctagcttcagaata 500
Query: 301 ctccatttatactttgaaaagtaatcaagtagcttttaaatgtatcaaaacaggtaaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctccatttatactttgaaaagtaatcaagtagcttttaaatgtatcaaaacaggtaaaag 560
Query: 361 gggaaatataatgtaagcttggtatgtaaatagtaaggatttggaaaatgcttttctgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggaaatataatgtaagcttggtatgtaaatagtaaggatttggaaaatgcttttctgaa 620
Query: 421 aagctttaacaaagtaagtaaaaattatgaagtaaagctttttagcacagaaagaa 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagctttaacaaagtaagtaaaaattatgaagtaaagctttttagcacagaaagaa 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
