Query= MSMg01no347_o18.b1 MSMg01no347_o18.b1 CHROMAT_FILE:
MSMg01no347_o18.b1 PHD_FILE: MSMg01no347_o18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:03 2005
(411 letters)
>mm_chr7_50958896_50959706
Length = 811
Score = 768 bits (397), Expect = 0.0
Identities = 405/409 (99%), Gaps = 4/409 (0%)
Strand = Plus / Plus
Query: 5 gaattcatttattcttc--ctggcaggctcttcatagtctggacatactatataatctgg 62
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttattc--caactggcaggctcttcatagtctggacatactatataatctgg 262
Query: 63 gctgcagtgatggctcggtgggtcaaggtactgccacatctagaaatctgtagtcaattt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gctgcagtgatggctcggtgggtcaaggtactgccacatctagaaatctgtagtcaattt 322
Query: 123 ctaggactcacatggaaaaagaagaaaaatcctgtaagttgttctctgactttacaagtg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctaggactcacatggaaaaagaagaaaaatcctgtaagttgttctctgactttacaagtg 382
Query: 183 gtccaggcatgcccaccccctaccatacacaaaataaataaataaataaattattaaaaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtccaggcatgcccaccccctaccatacacaaaataaataaataaataaattattaaaaa 442
Query: 243 gtcatgttatctgctcgaagccatctatctccccagcccccaaagaatgttgcttgtttt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gtcatgttatctgctcgaagccatctatctccccagcccccaaagaatgttgcttgtttt 502
Query: 303 tttgttttgtatctgggtcaatagaatagttttgatcctctattctgtcagtgtggcaca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tttgttttgtatctgggtcaatagaatagttttgatcctctattctgtcagtgtggcaca 562
Query: 363 tcatcacctttattgatttttacatattgaaatatctttttctcccagg 411
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tcatcacctttattgatttttacatattgaaatatctttttctcccagg 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_o18.g1 MSMg01no347_o18.g1 CHROMAT_FILE:
MSMg01no347_o18.g1 PHD_FILE: MSMg01no347_o18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:03 2005
(360 letters)
>mm_chr7_51133082_51133840
Length = 759
Score = 609 bits (315), Expect = e-179
Identities = 345/355 (97%), Gaps = 1/355 (0%)
Strand = Plus / Minus
Query: 3 atcttctgtaagtgcgttgacctactgagccatcttggacccctattaaactctttctga 62
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 439 atcttctgtaagtgcgttgacctactgagccatcttggacctctattaaactctttctga 380
Query: 63 aacagagtcactctatagctcagggtggtcttgaattccagataatcctgccccggctct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aacagagtcactctatagctcagggtggtcttgaattccagataatcctgccccggctct 320
Query: 123 ctaagtgctaagacggcaagtttgagtcaccgcacacacagtggctttacacagtcttcc 182
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 319 ctaagtgctaagacggcaggtttgagtcaccacacacacagtggctttacacagtcttcc 260
Query: 183 cgacatgcttcacggaagggaattaatttagattttgaagtgtgtttactgacctgtgat 242
|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 259 cgacatgcttcacggaagggaatt-atttagattttgaagtatgtttactgacctgtgat 201
Query: 243 tcatttctcttgatgattttgtggaataggggtctgtagactttgttttacagagaagga 302
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 200 tcatttctcttgatgattttgtggaataggggtctgtagacttcgttttacagataagga 141
Query: 303 aactgaggcacagagagacaagtgaacactgtaagtcaattaaaagctgaagctg 357
||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||
Sbjct: 140 aactgaggcacagagagacaagtaaacactggaagtcagttaaaagctgaagctg 86
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 759
Length adjustment: 9
Effective length of query: 351
Effective length of database: 750
Effective search space: 263250
Effective search space used: 263250
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
