Query= MSMg01no347_p02.b1 MSMg01no347_p02.b1 CHROMAT_FILE:
MSMg01no347_p02.b1 PHD_FILE: MSMg01no347_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:04 2005
(342 letters)
>mm_chr7_35490379_35491123
Length = 745
Score = 638 bits (330), Expect = 0.0
Identities = 340/344 (98%), Gaps = 3/344 (0%)
Strand = Plus / Minus
Query: 1 agcaacaagtggttgcagttttcattatcataaaacc--aaaaaaaaaatgtagccaaga 58
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 544 agcaacaagtggttgcagttttcattatcataaaaccaaaaaaaaaaaatgtagccaaga 485
Query: 59 aaaaaagatatgtgtcttccaccccaacacttggaacatcttgacatttaaatccaatta 118
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aaaaaagatatgtgtctttcaccccaacacttggaacatcttgacatttaaatccaatta 425
Query: 119 cctttttctccattcttgatgaggaagtgacatgaagcctgaagctcgaggctagataaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cctttttctccattcttgatgaggaagtgacatgaagcctgaagctcgaggctagataaa 365
Query: 179 tataccacgactctgactgcttctgaaatcctacaacttgtgtgggggattccgtgatgc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tataccacgactctgactgcttctgaaatcctacaacttgtgtgggggattccgtgatgc 305
Query: 239 cctgcccaccgtcaacctgtgtgggggtgcagggtcatacacttgccaagttagaagccc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cctgcccaccgtcaacctgtgtgggggtgcagggtcatacacttgccaagttagaagccc 245
Query: 299 ccggaagtgtttgctgggaga-tttttttagggcatttgatctc 341
||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 244 ccggaagtgtttgctgggagattttttttagggcatttgatctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 745
Length adjustment: 9
Effective length of query: 333
Effective length of database: 736
Effective search space: 245088
Effective search space used: 245088
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_p02.g1 MSMg01no347_p02.g1 CHROMAT_FILE:
MSMg01no347_p02.g1 PHD_FILE: MSMg01no347_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:04 2005
(161 letters)
>mm_chr7_35320452_35321012
Length = 561
Score = 284 bits (147), Expect = 1e-81
Identities = 156/159 (98%)
Strand = Plus / Plus
Query: 3 gttggaaaggcatgggggaagaacattgctcatctcgcagcagccaggaaacaggaacgg 62
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 203 gttggaaaggcatgggggaagaacattgctcatctcgaagcagccaggaaacaggaacgg 262
Query: 63 ggaaagagcagagatacaccctcccaccaggtccctcttcccacctcctccaataatgtt 122
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 263 ggaaagagcagagatacatcctcccaacaggtccctcttcccacctcctccaataatgtt 322
Query: 123 atcagattatggatctgtcgggggtgggtggttagttga 161
|||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atcagattatggatctgtcgggggtgggtggttagttga 361
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 561
Length adjustment: 8
Effective length of query: 153
Effective length of database: 553
Effective search space: 84609
Effective search space used: 84609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
