Query= MSMg01no349_b23.b1 MSMg01no349_b23.b1 CHROMAT_FILE:
MSMg01no349_b23.b1 PHD_FILE: MSMg01no349_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:38 2005
(411 letters)
>mm_chr7_142180869_142181679
Length = 811
Score = 745 bits (385), Expect = 0.0
Identities = 398/407 (97%), Gaps = 8/407 (1%)
Strand = Plus / Minus
Query: 5 ggaattctccataccatatggagcttgggagaaaggaagtggaggaagaaaacaaaccaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ggaattctccataccatatggagcttgggagaaaggaagtggaggaagaaaacaaaccaa 691
Query: 65 aaaacaaaacctgatgacggagagggtaaggaaacaaagcaactggacaaggagtctgga 124
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 aaaacaaaacctaatgacggagagggtaaggaaacaaagcaactggacaaggagtctgga 631
Query: 125 cagtgtgcagggctgagcagtcttgttgctataaatacaatttcttactggcaggctggg 184
||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 630 cagtgtgcagggctgagca--------gctataaatacaatttcttactggcaggctggg 579
Query: 185 gagctaacatcacagagcctttcttgtttttaaatatgtacccgtaagttaaagacatct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gagctaacatcacagagcctttcttgtttttaaatatgtacccgtaagttaaagacatct 519
Query: 245 gaaagccacataggacctatacgaacttccattacattgtatgagtctagtagagtaata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaaagccacataggacctatacgaacttccattacattgtatgagtctagtagagtaata 459
Query: 305 agagggatatagtttgagacacatccctattttttctttagtaaatgagctcccaaattg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agagggatatagtttgagacacatccctattttttctttagtaaatgagctcccaaattg 399
Query: 365 ctttcttttcagtaattccactttttccaacaatatatttgaatgcc 411
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ctttcttttcagtaattccactttttccaacaatatatttgaatgcc 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_b23.g1 MSMg01no349_b23.g1 CHROMAT_FILE:
MSMg01no349_b23.g1 PHD_FILE: MSMg01no349_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:38 2005
(438 letters)
>mm_chr7_142017516_142018351
Length = 836
Score = 760 bits (393), Expect = 0.0
Identities = 427/439 (97%), Gaps = 4/439 (0%)
Strand = Plus / Plus
Query: 1 acagagagccacctgcctctgtcttcctggtgtaagtgctcagactaaaggtgagactaa 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagagatccacctgcctctgtcttcctggtgtaagtgctcagactaaaggtgagactaa 260
Query: 61 atacta-tcaggtatttctcaggatctgctgaagggcagatgatttggcagatgctaggg 119
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atactaat-aggtatttctcaggatctgctgaagggcagatgatttggcagatgctaggg 319
Query: 120 aggtagagcattactagagtccccatgtatggggacttggtgaggcaagaggaaatgtgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 320 aggtagagcattactagagtccccatgtatggggacttggtgaggcaagaggagatgtgt 379
Query: 180 tgaaaggaggctttctcttctcttactggacttccccaggcctggacaggcctctagcta 239
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 380 tgaaaggaggctttctcttctcttactggactaccccagacctggacaggcctctagcta 439
Query: 240 aaggagatggctctccaggtcttaagaaacaggtctggaagagccccttggtgtcaaagg 299
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaggagatggctctccagctcttaagaaacaggtctggaagagccccttggtgtcaaagg 499
Query: 300 gggacccaacttggtcttcataattaatgtaactctcatttaaacagaacccccatattt 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aggacccaacttggtcttcataattaatgtaactctcatttaaacagaacccccatattt 559
Query: 360 cctccagttactgtccagagggccagtggctttcttacagacctatgaacatttttatct 419
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cctccagtcagtgtccagagggccagtggctttcttacagacctatgaacatttttatct 619
Query: 420 ctatatcattttgagacag 438
|||||||||||||||||
Sbjct: 620 --atatcattttgagacag 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 836
Length adjustment: 9
Effective length of query: 429
Effective length of database: 827
Effective search space: 354783
Effective search space used: 354783
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
