Query= MSMg01no351_g08.b1 MSMg01no351_g08.b1 CHROMAT_FILE:
MSMg01no351_g08.b1 PHD_FILE: MSMg01no351_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:38 2005
(364 letters)
>mm_chr7_95623513_95624276
Length = 764
Score = 630 bits (326), Expect = 0.0
Identities = 344/350 (98%)
Strand = Plus / Minus
Query: 1 agaattaaagaaaagcaaaaagaagccacatccccctttattccttctatgccaacccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 agaattaaagaaaagcaaaaagaagccacatccccctttattccttctatgccaacccag 469
Query: 61 aggactatcaagcagtaatactgtatctgaccatagagctattacataataccgtgtcag 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 aggactatcaagcagtaatgctgtatctgaccatagagctattacataataccgtgtcag 409
Query: 121 gtttagtcattgtatttagacaattggcagctattaacttgaagcagcagtggtatatgg 180
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 408 ctttagtcattgtatttagacaattggcagctactaacttgaagcagcagtggtatatgg 349
Query: 181 gagaacaaatgatggagcagttgggcagcaggagacttttatcaactacttctttataac 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 348 gagaacaaatgatggagcagttgggcagcaggagacatttatcaactacttctttataac 289
Query: 241 cttgttctttttaacctttatctaaggtacactacttctactatcatctttctctatttc 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 cttgttctttttaacctttttctaaggtacactacttctactatcatctttctctatttc 229
Query: 301 tctgagtctctgagtctagtggaagatggtgtgtgtgtgtgtgtgtgtgt 350
|||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 228 tctgagtctctgagtctagtagaagatggtgtgtgtgtgtgtgtgtgtgt 179
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_g08.g1 MSMg01no351_g08.g1 CHROMAT_FILE:
MSMg01no351_g08.g1 PHD_FILE: MSMg01no351_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:38 2005
(521 letters)
>mm_chr7_95425296_95426219
Length = 924
Score = 967 bits (500), Expect = 0.0
Identities = 517/524 (98%), Gaps = 3/524 (0%)
Strand = Plus / Plus
Query: 1 agagacagaagtggtttgttcttcaaccacattgcttcctcggactgcatgtactcagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagacagaagtggtttgttcttcaaccacattgcttcctcggactgcatgtactcagtg 260
Query: 61 gaaaaaaaaaaaaa---gtctgcacataaatatctgtgatctgtgggatggggtttaaaa 117
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaaaaaaaaaaaaaagtctgcacataaatatctgtgatctgtgggatggggtttaaaa 320
Query: 118 agaaaaaaagtgcacaagcctactaggtcaaagaggctcatcaagtctgcctggttcatc 177
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaacaaagtgcacaagcctactaggtcaaagaggctcatcaagtctgcctggttcatc 380
Query: 178 tctgtattctcagatttgctcagaatgatcatgatcccagccaacaacagccaggcaact 237
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgtattctcagattagctcagaatgatcatgatcccagccaacaacagccaggcaact 440
Query: 238 caaaacagctctcgcaagagcaggatgcttcgctaaagattactacttaacaattgcagg 297
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaaacagctctcacaagagcaggatgcttcgctaaagattactacttaacaattgcagg 500
Query: 298 caagaagactgacagaggaggcaaggttcaactatgctcccttcagctcgcccttgggaa 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagaagactgacagaggaggcaaggttcaactatgctcccttcagctcgcccttgggaa 560
Query: 358 agcctgacacaggagctcagaagaccacttcatcctgagcaagctacttcctctttctct 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcctgacacaggagctcagaagaccacttcatcctgagcaagctacttcctctttctct 620
Query: 418 aattcttgctttcattctgaaaacagaagggcttgagcaatgtgatcacaatgtgatcac 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aattcttgctttcattctgaaaacagaagggcttgagcaatgtgatcacaatgtgatcac 680
Query: 478 cccagtcacccccaacccccaccccattcaacttaatcctaata 521
||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 681 cccagtcacccgcaacccccaccccattcaacttaatcctaata 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 924
Length adjustment: 10
Effective length of query: 511
Effective length of database: 914
Effective search space: 467054
Effective search space used: 467054
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
