Query= MSMg01no351_m17.b1 MSMg01no351_m17.b1 CHROMAT_FILE:
MSMg01no351_m17.b1 PHD_FILE: MSMg01no351_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:08 2005
(531 letters)
>mm_chr7_122065140_122066070
Length = 931
Score = 1019 bits (527), Expect = 0.0
Identities = 530/531 (99%)
Strand = Plus / Plus
Query: 1 tcctatccataacattcacaggaagaatgagtgagtgagtgagtgagtgagtgagtgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctatccataacattcacaggaagaatgagtgagtgagtgagtgagtgagtgagtgact 260
Query: 61 gaatgactgactgactgactgaattactgaatggatgaatgaatgaatgattagattcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatgactgactgactgactgaattactgaatggatgaatgaatgaatgattagattcaa 320
Query: 121 agatgtagagaagactaagtccagggtggccaggtgactgccagtcagagctggagttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatgtagagaagactaagtccagggtggccaggtgactgccagtcagagctggagttgt 380
Query: 181 gtctcagagtcacccctcttagtagtagttatttaaaatagagacagtaatacatgtcct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 gtctcagagtcacccctcttagtagtagttatttaaaatagagacagtaatacatgccct 440
Query: 241 gcaaagcagcaggtgtgaggatcaaaaggagactgcagataaagcttctagaatggtgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaaagcagcaggtgtgaggatcaaaaggagactgcagataaagcttctagaatggtgct 500
Query: 301 gagcacacagtttgcacccaatatttttaggctctggcctggcccaaagtctcccagagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagcacacagtttgcacccaatatttttaggctctggcctggcccaaagtctcccagagt 560
Query: 361 gtcagtgacaatcccctgacctttgagaaggtttacgaccataggcagcctggtctatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtcagtgacaatcccctgacctttgagaaggtttacgaccataggcagcctggtctatct 620
Query: 421 agggcaactctggacacaacctcactgcacagagaatgatggattgaatgaccctggacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agggcaactctggacacaacctcactgcacagagaatgatggattgaatgaccctggacc 680
Query: 481 ctttccaatcccctttgggtcttgaaaccaagggtgtacttctgatcctga 531
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctttccaatcccctttgggtcttgaaaccaagggtgtacttctgatcctga 731
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space: 479841
Effective search space used: 479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_m17.g1 MSMg01no351_m17.g1 CHROMAT_FILE:
MSMg01no351_m17.g1 PHD_FILE: MSMg01no351_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:08 2005
(479 letters)
>mm_chr7_122258785_122259664
Length = 880
Score = 890 bits (460), Expect = 0.0
Identities = 475/480 (98%), Gaps = 1/480 (0%)
Strand = Plus / Minus
Query: 1 tttgtttgagagacttttctcagatgtatataaatatgatttaaaactttttggaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tttgtttgagagacttttctcagatgtatataaatatgatttaaaactttttggaaacaa 428
Query: 61 gtgttagacttagtaggaagtactgtataattctgtggaaaggaaacaatggattattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gtgttagacttagtaggaagtactgtataattctgtggaaaggaaacaatggattattaa 368
Query: 121 cgtgtttttcaaggtttcatacacgcagcaggatacattctggtcacacccattcctcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cgtgtttttcaaggtttcatacacgcagcaggatacattctggtcacacccattcctcta 308
Query: 181 ccctctctcctctgaccacttccggcaaccctctaccttcctctcatcaagtacccatcc 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 307 ccctctctcctctgaccacttccggcaaccctctaccttcctctcctcaagtacccatcc 248
Query: 241 cactctcatgtctttttggtttt-gttggtggtggtgttaattttggttttgtgacccat 299
|||||||||||| ||||| |||| |||| |||||||||||||||||||||||||||||||
Sbjct: 247 cactctcatgtccttttgctttttgttgttggtggtgttaattttggttttgtgacccat 188
Query: 300 tgagttcacccaggggcattcacatgggcctggatgtggagatctccagtgaagcacaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tgagttcacccaggggcattcacatgggcctggatgtggagatctccagtgaagcacaaa 128
Query: 360 tacctcaccagtggctataccacagaagacagtgagcaccccactctgccccagcagccc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tacctcaccagtggctataccacagaagacagtgagcaccccactctgccccagcagccc 68
Query: 420 tagactttaattctctcccccagacaggacaggcattcccttctccagctctgatcgtat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 tagactttaattctctcccccagacaggacaggcattcccttctccagctctgatcgtat 8
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 880
Length adjustment: 10
Effective length of query: 469
Effective length of database: 870
Effective search space: 408030
Effective search space used: 408030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
