MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-352I02
Chromosome	7 (Build37)
Map Location	135,915,589 - 135,915,738
singlet/doublet	singlet
Overlap gene	Sec23ip
Upstream gene	Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik
Downstream gene	LOC210714, LOC100043144, Ppapdc1a, Brwd2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Tmem142c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269999 MGI:3039586
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Setd1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233904 MGI:2446244
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hsd3b7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101502 MGI:2141879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Stx1b2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56216 MGI:1930705
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Stx4a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20909 MGI:893577
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp668 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244219 MGI:2442943
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp646 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233905 MGI:3665412
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC039632 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330657 MGI:2652890
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vkorc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27973 MGI:106442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bckdk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12041 MGI:1276121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myst1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67773 MGI:1915023
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prss8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76560 MGI:1923810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prss36 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77613 MGI:1924863
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fus (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233908 MGI:1353633
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pycard (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66824 MGI:1931465
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trim72 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434246 MGI:3612190
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC436010 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:436010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 3 Proteins pseudo : _no_value

name	EG668675 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668675 MGI:3648098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 68 ESTs, 4 Proteins

name	Itgam (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16409 MGI:96607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Itgax (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16411 MGI:96609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itgad (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381924 MGI:3578624
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cox6a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12862 MGI:104649
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043133 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043133
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein

name	Armc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233912 MGI:2384586
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tgfb1i1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21804 MGI:102784
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc5a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246787 MGI:2181411
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC017158 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233913 MGI:2384572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG628781 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628781 MGI:3644024
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 347 ESTs, 4 Proteins

name	Rgs10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67865 MGI:1915115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043643 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043643
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Tial1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21843 MGI:107913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bag3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29810 MGI:1352493
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG639030 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:639030 MGI:3644893
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Inpp5f (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101490 MGI:2141867
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043651 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043651
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	1110007A13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210711 MGI:1920977
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sec23ip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207352 MGI:2450915
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC210714 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:210714
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 16 Proteins pseudo : _no_value

name	LOC100043144 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043144
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Ppapdc1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381925 MGI:2685936
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Brwd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207425 MGI:1920230
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem142c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802906 GeneID:269999 MGI:3039586
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 142C transcript_id : NM_198424.3

name	Setd1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119508421 GeneID:233904 MGI:2446244
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET domain containing 1A transcript_id : NM_178029.3

name	Hsd3b7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:100817044 GeneID:101502 MGI:2141879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 transcript_id : NM_133943.2

name	Hsd3b7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:100817047 GeneID:101502 MGI:2141879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 transcript_id : NM_001040684.1

name	Stx1b2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134032003 GeneID:56216 MGI:1930705
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs product : syntaxin 1B2 transcript_id : NM_024414.2

name	Stx4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892174 GeneID:20909 MGI:893577
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : syntaxin 4A (placental) transcript_id : NM_009294.3

name	Zfp668 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802081 GeneID:244219 MGI:2442943
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 668 transcript_id : NM_146259.3

name	Zfp646 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51491886 GeneID:233905 MGI:3665412
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 646 transcript_id : NM_172749.3

name	BC039632 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486910 GeneID:330657 MGI:2652890
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC039632 transcript_id : NM_001081268.1

name	Vkorc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45827741 GeneID:27973 MGI:106442
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vitamin K epoxide reductase complex, subunit 1 transcript_id : NM_178600.2

name	Bckdk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88853585 GeneID:12041 MGI:1276121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : branched chain ketoacid dehydrogenase kinase transcript_id : NM_009739.3

name	Myst1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312789 GeneID:67773 MGI:1915023
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MYST histone acetyltransferase 1 transcript_id : NM_026370.1

name	Prss8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19111159 GeneID:76560 MGI:1923810
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protease, serine, 8 (prostasin) transcript_id : NM_133351.1

name	Prss36 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487022 GeneID:77613 MGI:1924863
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protease, serine, 36 transcript_id : NM_001081374.1

name	Fus (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112734868 GeneID:233908 MGI:1353633
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fusion, derived from t(12;16) malignant liposarcoma (human) transcript_id : NM_139149.2

name	Pycard (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31581581 GeneID:66824 MGI:1931465
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PYD and CARD domain containing transcript_id : NM_023258.3

name	Trim72 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370482 GeneID:434246 MGI:3612190
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif-containing 72 transcript_id : NM_001079932.2

name	EG668675 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257801 GeneID:668675 MGI:3648098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 68 ESTs, 4 Proteins product : predicted gene, EG668675 transcript_id : XM_001480559.1

name	Itgam (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:132626288 GeneID:16409 MGI:96607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin alpha M transcript_id : NM_001082960.1

name	Itgam (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:132626294 GeneID:16409 MGI:96607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin alpha M transcript_id : NM_008401.2

name	Itgax (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130485 GeneID:16411 MGI:96609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin alpha X transcript_id : NM_021334.2

name	Itgad (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71274167 GeneID:381924 MGI:3578624
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin, alpha D transcript_id : NM_001029872.1

name	Cox6a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83816955 GeneID:12862 MGI:104649
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome c oxidase, subunit VI a, polypeptide 2 transcript_id : NM_009943.2

name	LOC100043133 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257717 GeneID:100043133
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : similar to crooked legs CG14938-PB transcript_id : XM_001479568.1

name	Armc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:48928021 GeneID:233912 MGI:2384586
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : armadillo repeat containing 5 transcript_id : NM_146205.2

name	Tgfb1i1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254611 GeneID:21804 MGI:102784
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transforming growth factor beta 1 induced transcript 1 transcript_id : NM_009365.2

name	Slc5a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892427 GeneID:246787 MGI:2181411
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 5 (sodium/glucose cotransporter), member 2 transcript_id : NM_133254.3

name	BC017158 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21704183 GeneID:233913 MGI:2384572
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC017158 transcript_id : NM_145590.1

name	EG628781 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94381054 GeneID:628781 MGI:3644024
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 346 ESTs, 4 Proteins product : predicted gene, EG628781, transcript variant 1 transcript_id : XM_902363.2

name	Rgs10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388581 GeneID:67865 MGI:1915115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulator of G-protein signalling 10 transcript_id : NM_026418.2

name	LOC100043643 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257803 GeneID:100043643
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043643 transcript_id : XM_001480599.1

name	Tial1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114687767 GeneID:21843 MGI:107913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Tia1 cytotoxic granule-associated RNA binding protein-like 1 transcript_id : NM_009383.2

name	Bag3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115270959 GeneID:29810 MGI:1352493
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bcl2-associated athanogene 3 transcript_id : NM_013863.4

name	EG639030 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94381055 GeneID:639030 MGI:3644893
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG639030 transcript_id : XM_001003100.1

name	Inpp5f (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142360458 GeneID:101490 MGI:2141867
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inositol polyphosphate-5-phosphatase F transcript_id : NM_178641.4

name	LOC100043651 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257805 GeneID:100043651
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to unknown transcript_id : XM_001480620.1

name	1110007A13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130227 GeneID:210711 MGI:1920977
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110007A13 gene transcript_id : NM_145955.3

name	Sec23ip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71725364 GeneID:207352 MGI:2450915
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Sec23 interacting protein transcript_id : NM_001029982.1

name	Ppapdc1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124377994 GeneID:381925 MGI:2685936
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidic acid phosphatase type 2 domain containing 1A transcript_id : NM_001080963.1

name	Brwd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368235 GeneID:207425 MGI:1920230
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain and WD repeat domain containing 2 transcript_id : NM_172255.2

name	Tmem142c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38259222 CCDS:CCDS21878.1 GeneID:269999 MGI:3039586
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : calcium release-activated calcium channel 3 product : hypothetical protein LOC269999 protein_id : NP_940816.1

name	Setd1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119508422 GeneID:233904 MGI:2446244
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : non-selective cation channel 1 product : SET domain containing 1A protein_id : NP_821172.2

name	Hsd3b7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:100817045 GeneID:101502 MGI:2141879
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004769 - steroid delta-isomerase activity [Evidence IEA] GO_process : GO:0006700 - C21-steroid hormone biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 isoform a protein_id : NP_598704.2

name	Hsd3b7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:100817048 GeneID:101502 MGI:2141879
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003854 - 3-beta-hydroxy-delta5-steroid dehydrogenase activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004769 - steroid delta-isomerase activity [Evidence IEA] GO_process : GO:0006700 - C21-steroid hormone biosynthesis [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 isoform b protein_id : NP_001035774.1

name	Stx1b2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13259378 GeneID:56216 MGI:1930705
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008565 - protein transporter activity [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : syntaxin1B; syntaxin 1 b product : syntaxin 1B2 protein_id : NP_077725.1

name	Stx4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678177 CCDS:CCDS21880.1 GeneID:20909 MGI:893577
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0008565 - protein transporter activity [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0016079 - synaptic vesicle exocytosis [Evidence TAS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : syntaxin 4A (placental) protein_id : NP_033320.1

name	Zfp668 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122853 CCDS:CCDS21881.1 GeneID:244219 MGI:2442943
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger protein 668 protein_id : NP_666371.1

name	Zfp646 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46358380 CCDS:CCDS21882.1 GeneID:233905 MGI:3665412
definition	codon_start : 1 product : zinc finger protein 646 protein_id : NP_766337.2

name	BC039632 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486911 GeneID:330657 MGI:2652890
definition	GO_function : GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : hypothetical protein LOC330657 protein_id : NP_001074737.1

name	Vkorc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519915 CCDS:CCDS21883.1 GeneID:27973 MGI:106442
definition	EC_number : 1.1.4.1 GO_component : GO:0005783 - endoplasmic reticulum [Evidence ISS] [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0047057 - vitamin-K-epoxide reductase (warfarin-sensitive) activity [Evidence ISS] [Evidence IDA] GO_process : GO:0050820 - positive regulation of coagulation [Evidence IMP]; GO:0042371 - vitamin K biosynthesis [Evidence ISS]; GO:0042373 - vitamin K metabolism [Evidence IDA] codon_start : 1 note : vitamin K1 epoxide reductase (warfarin-sensitive); phylloquinone epoxide reductase product : vitamin K epoxide reductase complex, subunit 1 protein_id : NP_848715.1

name	Bckdk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753164 CCDS:CCDS21884.1 GeneID:12041 MGI:1276121
definition	GO_component : GO:0005947 - alpha-ketoglutarate dehydrogenase complex (sensu Eukaryota) [Evidence ISS]; GO:0005739 - mitochondrion [Evidence ISS] [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA] GO_process : GO:0009083 - branched chain family amino acid catabolism [Evidence ISS]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : branched chain keto acid dehydrogenase kinase; BCKD-kinase product : branched chain ketoacid dehydrogenase kinase protein_id : NP_033869.1

name	Myst1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312790 CCDS:CCDS21885.1 GeneID:67773 MGI:1915023
definition	GO_component : GO:0000776 - kinetochore [Evidence IDA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004402 - histone acetyltransferase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : histone acetyltransferase Myst1 product : MYST histone acetyltransferase 1 protein_id : NP_080646.1

name	Prss8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19111160 GeneID:76560 MGI:1923810
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : channel activating protease 1 product : prostasin protein_id : NP_579929.1

name	Prss36 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487023 GeneID:77613 MGI:1924863
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] [Evidence ISS] GO_process : GO:0006508 - proteolysis [Evidence IEA] [Evidence IC] codon_start : 1 note : polyserase-2; polyserase-2 protein product : protease, serine, 36 protein_id : NP_001074843.1

name	Fus (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20982845 CCDS:CCDS21886.1 GeneID:233908 MGI:1353633
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA] codon_start : 1 note : hnRNP P2; RNA-binding protein FUS; translocated in liposarcoma; pigpen protein product : pigpen protein_id : NP_631888.1

name	Pycard (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560222 CCDS:CCDS21888.1 GeneID:66824 MGI:1931465
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005829 - cytosol [Evidence IDA]; GO:0005576 - extracellular region [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0016505 - apoptotic protease activator activity [Evidence ISS]; GO:0030693 - caspase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence ISS]; GO:0032090 - Pyrin domain binding [Evidence ISS] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0006954 - inflammatory response [Evidence IMP]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0043280 - positive regulation of caspase activity [Evidence ISS]; GO:0050718 - positive regulation of interleukin-1 beta secretion [Evidence ISS]; GO:0006508 - proteolysis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IMP]; GO:0043281 - regulation of caspase activity [Evidence IMP] codon_start : 1 exception : mismatches in translation product : PYD and CARD domain containing protein_id : NP_075747.2

name	Trim72 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121247302 GeneID:434246 MGI:3612190
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : mitsugumin 53 product : tripartite motif-containing 72 protein_id : NP_001073401.1

name	EG668675 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257802 GeneID:668675 MGI:3648098
definition	codon_start : 1 product : similar to Armadillo repeat containing, X-linked 3 protein_id : XP_001480609.1

name	Itgam (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:132626289 GeneID:16409 MGI:96607
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IDA]; GO:0008305 - integrin complex [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0001846 - opsonin binding [Evidence IDA] [Evidence IMP]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0050798 - activated T cell proliferation [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IMP]; GO:0045123 - cellular extravasation [Evidence IMP]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0030593 - neutrophil chemotaxis [Evidence IMP]; GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 note : isoform 1 precursor is encoded by transcript variant 1; CD11B (p170); complement component receptor 3 alpha-a; macrophage antigen alpha; complement receptor type 3; cell surface glycoprotein MAC-1 alpha subunit; leukocyte adhesion receptor MO1; Mac-1 alpha product : integrin alpha M isoform 1 precursor protein_id : NP_001076429.1

name	Itgam (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:132626295 CCDS:CCDS21889.1 GeneID:16409 MGI:96607
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IDA]; GO:0008305 - integrin complex [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0001846 - opsonin binding [Evidence IDA] [Evidence IMP]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0050798 - activated T cell proliferation [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IMP]; GO:0045123 - cellular extravasation [Evidence IMP]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0030593 - neutrophil chemotaxis [Evidence IMP]; GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 note : isoform 2 precursor is encoded by transcript variant 2; CD11B (p170); complement component receptor 3 alpha-a; macrophage antigen alpha; complement receptor type 3; cell surface glycoprotein MAC-1 alpha subunit; leukocyte adhesion receptor MO1; Mac-1 alpha product : integrin alpha M isoform 2 precursor protein_id : NP_032427.2

name	Itgax (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946646 GeneID:16411 MGI:96609
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0050798 - activated T cell proliferation [Evidence IMP]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA] codon_start : 1 note : CD11C (p150) alpha polypeptide; complement receptor 4; integrin alpha X (Cd11c); integrin aX product : integrin alpha X protein_id : NP_067309.1

name	Itgad (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71274168 CCDS:CCDS21890.1 GeneID:381924 MGI:3578624
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0008305 - integrin complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0050798 - activated T cell proliferation [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA] codon_start : 1 product : integrin, alpha D protein_id : NP_001025043.1

name	Cox6a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83816956 CCDS:CCDS21891.1 GeneID:12862 MGI:104649
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005740 - mitochondrial envelope [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : subunit VIaH (heart-type) product : cytochrome c oxidase, subunit VI a, polypeptide 2 protein_id : NP_034073.2

name	LOC100043133 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257718 GeneID:100043133
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479618.1

name	Armc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:48928022 CCDS:CCDS21892.1 GeneID:233912 MGI:2384586
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : armadillo repeat containing 5 protein_id : NP_666317.2

name	Tgfb1i1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678313 CCDS:CCDS21893.1 GeneID:21804 MGI:102784
definition	GO_component : GO:0005925 - focal adhesion [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045165 - cell fate commitment [Evidence IGI]; GO:0030855 - epithelial cell differentiation [Evidence IGI]; GO:0016331 - morphogenesis of embryonic epithelium [Evidence IMP]; GO:0045599 - negative regulation of fat cell differentiation [Evidence IGI] codon_start : 1 product : transforming growth factor beta 1 induced transcript 1 protein_id : NP_033391.1

name	Slc5a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875434 CCDS:CCDS21894.1 GeneID:246787 MGI:2181411
definition	GO_function : GO:0031402 - sodium ion binding [Evidence IEA]; GO:0005351 - sugar porter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA] codon_start : 1 note : low affinity sodium-dependent glucose cotransporter product : solute carrier family 5 (sodium/glucose cotransporter), member 2 protein_id : NP_573517.1

name	BC017158 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704184 CCDS:CCDS21895.1 GeneID:233913 MGI:2384572
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC233913 protein_id : NP_663565.1

name	EG628781 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82907613 GeneID:628781 MGI:3644024
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_907456.1

name	Rgs10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385914 CCDS:CCDS21896.1 GeneID:67865 MGI:1915115
definition	GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0009968 - negative regulation of signal transduction [Evidence IEA] codon_start : 1 product : regulator of G-protein signalling 10 protein_id : NP_080694.1

name	LOC100043643 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257804 GeneID:100043643
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480649.1

name	Tial1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678349 CCDS:CCDS21897.1 GeneID:21843 MGI:107913
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0017091 - AU-specific RNA binding [Evidence IDA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007281 - germ cell development [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0017145 - stem cell division [Evidence IMP] codon_start : 1 note : Tial1 cytotoxic granule-associated RNA-binding protein-like 1 product : Tial1 cytotoxic granule-associated RNA binding protein-like 1 protein_id : NP_033409.1

name	Bag3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115270960 CCDS:CCDS21898.1 GeneID:29810 MGI:1352493
definition	GO_component : GO:0005829 - cytosol [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0043066 - negative regulation of apoptosis [Evidence IDA]; GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : Bcl-2-interacting death supressor; Bcl-2-interacting death suppressor product : Bcl2-associated athanogene 3 protein_id : NP_038891.4

name	EG639030 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94381056 GeneID:639030 MGI:3644893
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001003100.1

name	Inpp5f (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542017 CCDS:CCDS21899.1 GeneID:101490 MGI:2141867
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : inositol polyphosphate-5-phosphatase F protein_id : NP_848756.2

name	LOC100043651 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257806 GeneID:100043651
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480670.1

name	1110007A13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122389 GeneID:210711 MGI:1920977
definition	codon_start : 1 product : hypothetical protein LOC210711 protein_id : NP_666067.1

name	Sec23ip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71725365 CCDS:CCDS21900.1 GeneID:207352 MGI:2450915
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : Sec23 interacting protein protein_id : NP_001025153.1

name	Ppapdc1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124377995 GeneID:381925 MGI:2685936
definition	codon_start : 1 product : phosphatidic acid phosphatase type 2 domain containing 1A protein_id : NP_001074432.1

name	Brwd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986547 GeneID:207425 MGI:1920230
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : WD repeat domain 11 product : bromodomain and WD repeat domain containing 2 protein_id : NP_758459.1

name	LOC100043144 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043144
definition	number : 2 pseudo : _no_value

name	LOC100043144 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043144
definition	number : 1 pseudo : _no_value

name	LOC436010 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257800 GeneID:436010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 3 Proteins product : similar to Yip1 domain family, member 5 pseudo : _no_value transcript_id : XR_034748.1

name	LOC210714 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257807 GeneID:210714
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 16 Proteins product : similar to Rho family GTPase 2 pseudo : _no_value transcript_id : XR_034777.1

clone name	MSMg01-165P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272D07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-271N09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-524H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541B13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-404P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371L11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-378B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104G04
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-352I02.T7 (MSMg01no352_i02.b1)	MSMg01-352I02.TJ (MSMg01no352_i02.g1)
ACC	AG463617	AG463618
length	805	1,268
length of high quality (start - end)	154 (52 - 205)	---
definition	CHROMAT_FILE: MSMg01no352_i02.b1 PHD_FILE: MSMg01no352_i02.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:45:04 2005	CHROMAT_FILE: MSMg01no352_i02.g1 PHD_FILE: MSMg01no352_i02.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:45:05 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NNTTTGTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XCGCGGAATTCCTTAATTGTCTGGCAGTGTATCTTGTGATAGCTAAAAAC TGACTTTTCCTCAGGATCATCTTATACTGTTGTGGTGTTTCATAGGAGCA GAAAAAAGCAGCAGAAGAAAAGAAGGCAGCGCTGGCTGCTTTGACNAAAG GACAAAACGAAAGTGCTCCAAAAACTAANGAAATGGCTTCTCCATCTTCA AATAAAGNNNCCAGATCGTCGNNGTGGGGTGGGGGAGCGCGGGAGCGGCG AACCGGGGGGGGGCGGGGGGGGCCGCGCGCGGGGGGCGGGGGGGGGGAAG GGAGGCGGGCGACACGCGCCACCCAGCAACGGGGGGGGGTTNNNNNNNNC NNNTTGCCCGCCCCGGGAAGGGGTGGGGGNNNNNNNNNNCTNNNNNNNNC NCNNNNNNNNCCCTCTNNNNNNNNNNNNNNNNNNNNCNNTNTNNCCTCCT TCTTTTTNGTTTTCNNNTTTTCTNCTTTTTTTNNNNTTTTTTTNTNNTTT CCTTTTNTTTTTTTTTTTTTTTTTCTTTTNTTTTTTTTTTTTTTTCTTTC TCCCTTTTTTCTCTNCCCCCCTTTTTTCCTTTTTTTTTTTTTTTTTCTTT TTTTCTTTTTTTTTTTTTTTTTTTTNNTNTTTTTTTTTTTCTTTTTTTTT TTTTTTTTTTTTCTCTTTTTTTTTTTTTTTCCTTTTNCCCCTCTCCTTCT TTTTNTTTTNTNTNNTTCTTCTTCTTTTTTTTCCCCTACCCCTCGCCGAC AACAG	CACGCAGCAAGAACAAAAGAAGGTGCCCCCATTCGGCGAAGCTATAGAGG CGTTTTCTAACAAATTTATCGCACTCCCCCCCTTCAGCCTCTCTCCTGTG GCGCTCCCTCCACCGCATTATATAAATCCGATATATAGAAGCTTTCTACC TTAATATTAAGATAGCACCTATCAATATAGTGTCAAGAACCACCTCCCAT ATCTACCCTATTCCGAAACACGACCCCATCTTCTTCATTCATTTTTTCAT CGCTCCCCCTTACCTCCCATATACCACACTCACCAATCGCTTTTATCCAA TCCTCATTATATGACAATCTCTCTTATCTATACCACACCGTACCCTACCC CTACGCTATTTCTTTCGGTATTCTTTCATTTATACTCACTAACCACCATA TTTTTTAAACTACACCTCCATACTTTATATTACTCCCCTCTCTATAATAA GAGTCCCCCAAAAACAACTAATAAAATCAGATCATTATGTCCCTCCCCTT ACTTTTACTTATCTTCCCGTTTCTTCTCGGGTCCCCATCACACTCTAGCC ATATCTATCTAAATTATTGCCTTATTCCATGCCGCACTGAGACACCAACT TTAAATATATCTTAGCCTGGTATAAAATGGCGTCCGTTAAATAACTATAA TTTGTTAACCGCCTCATATATTTCTATTTCCCATCTACCCATTGCGACCA AACATACCCGAATTAATCACCTATTAGCTCGCCATTCCCATCTACCCCCT TATGTCCGCTATTATCTGCTCAATTCTGTTCTTCTGCATACACGGCCTAT TATACCTAATAGAAACNACATAGATAACTAATCAATCCGGCTCGTCTTAA TCTTACTAATGTATACCGCCTCCATATATTAGACTTTATTCCTATATTAA ATTAATTTCACCACATACGTCAATACTTGTCCGCCATATCCCTCTATACC GTAAAACTAACCGTACGACTACATAATATATACTATCGCCGTTCTGTATT ACCCTATTATATTTTCCTACTAGTATAGCTATTATCTTGTCTCTCGCTAC TACCCTCTTTATCCTCTCCAGCACGTCTCATCCCGACACATTATCTTTCC CTCTCTCCCTCCCGCTCACGCCTTCTGTGCTACTTCACATATGACCCCAC CTTTCTCACGCCGCATACAACGATCGACTTGCATGTCTATCCATAACATG CGGCCCGCATACATTCATTATAACTTTCCGCGCGCTATATCTAATATCAC TCGCGTTAGCCGATTTAT
quality values	Open. Hide. 0 0 3 7 6 6 6 8 8 8 8 19 14 22 33 28 37 37 37 32 32 37 37 37 35 32 41 37 37 37 34 19 17 10 10 10 19 21 9 7 7 7 7 7 13 23 27 27 22 21 21 29 29 41 37 33 33 33 28 41 37 37 18 9 9 9 9 6 6 6 6 8 8 10 18 25 41 50 50 48 48 48 50 48 59 59 41 41 37 37 37 37 59 23 19 9 9 9 9 18 37 37 37 47 59 59 59 59 48 47 37 37 28 37 37 43 39 47 47 47 47 48 48 48 53 50 50 57 57 57 68 68 68 68 68 68 68 54 54 57 57 57 57 48 48 43 43 43 43 41 47 47 59 59 59 41 41 34 32 25 26 26 28 36 37 41 41 37 39 43 59 44 44 30 27 14 30 28 40 59 47 47 59 59 59 59 59 47 47 47 59 39 25 25 3 0 3 29 27 35 37 37 14 9 9 9 9 9 9 9 9 9 19 19 33 34 25 21 12 15 16 33 31 31 39 25 17 3 0 3 13 10 11 9 9 9 9 9 11 28 24 22 13 18 11 15 12 8 6 6 6 6 6 6 6 6 3 0 0 0 3 7 6 6 6 8 6 6 6 6 3 0 0 3 10 12 6 6 6 6 8 6 10 10 10 10 6 6 6 6 6 8 6 6 6 6 8 8 9 9 8 8 8 8 8 8 9 10 10 10 10 9 9 9 9 8 8 8 8 8 8 9 9 9 8 8 8 8 8 8 8 8 8 7 7 6 6 6 7 9 10 10 10 10 9 10 8 10 8 9 8 8 8 8 8 8 8 6 6 6 6 6 6 6 8 8 8 8 8 8 11 8 8 8 6 6 6 6 6 6 10 19 18 15 12 10 8 6 6 6 3 0 0 0 0 0 0 0 0 3 0 0 0 3 7 8 9 17 9 7 7 8 8 9 8 8 8 8 9 8 9 13 9 9 9 12 17 15 3 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 3 0 3 0 0 0 0 0 0 0 0 3 8 11 8 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 3 0 3 0 0 3 15 11 10 10 8 6 6 6 17 8 13 3 0 3 8 8 8 10 3 0 0 0 3 23 19 19 17 3 0 3 6 7 9 12 11 17 3 0 0 0 0 3 18 18 26 13 17 3 0 3 0 0 3 8 8 9 9 9 21 21 3 0 3 25 25 39 30 26 12 17 8 8 8 22 25 12 14 12 25 24 19 10 10 3 0 3 21 19 24 17 17 17 24 24 25 25 28 22 22 8 8 8 6 8 8 6 7 9 10 16 23 21 21 9 9 10 13 9 3 0 3 7 8 7 7 7 6 15 17 15 15 16 19 21 19 10 9 9 19 9 7 7 15 15 24 24 25 25 28 25 25 24 24 17 15 13 12 18 25 23 33 31 31 31 31 31 30 30 24 23 21 21 24 24 29 26 32 23 21 3 0 0 3 0 3 21 19 24 9 9 19 22 22 17 19 8 7 9 9 9 9 17 8 12 12 25 23 24 20 19 14 21 19 19 19 8 8 8 12 13 8 8 8 10 10 19 15 15 8 8 8 19 21 34 30 18 15 9 7 7 3 0 3 22 17 11 11 11 9 9 9 9 8 8 9 12 8 17 3 0 3 23 23 3 0 3 0 3 0 0 3 6 6 8 8 10 10 19 27 32 26 29 32 22 13 8 6 6 13 10 10 9 9 9 15 10 8 8 8 6 6 6 6 6 6 10 11 11 9 9	Open. Hide. 8 8 8 8 8 8 8 8 9 11 11 12 9 11 10 8 8 8 6 6 8 8 6 7 8 7 15 8 8 6 6 8 6 8 8 8 8 10 11 10 10 10 10 10 10 9 9 9 12 8 8 9 9 8 10 8 8 8 8 8 8 8 8 6 6 8 8 11 8 10 7 6 8 8 8 8 8 8 10 10 10 10 8 8 6 6 8 6 8 8 8 9 12 8 10 8 8 8 8 8 8 8 8 8 8 10 8 8 8 10 6 6 8 6 6 6 8 11 9 12 10 10 10 8 8 8 10 10 8 6 6 6 7 6 6 6 10 10 8 8 8 6 6 8 8 10 8 6 6 8 6 8 8 6 6 6 8 10 15 10 10 13 10 10 11 11 11 9 8 8 8 8 8 8 10 10 10 15 13 12 11 9 9 9 9 10 9 11 11 8 10 6 7 7 10 6 6 6 6 8 8 6 6 6 11 8 9 8 10 8 8 8 8 10 11 8 8 7 6 6 6 6 6 6 8 8 8 6 6 8 6 10 15 10 17 12 11 8 10 8 8 8 9 12 19 18 10 11 8 8 8 8 6 11 15 16 12 10 10 8 8 6 6 6 6 8 6 6 6 6 6 6 8 8 8 8 8 8 11 8 8 6 6 6 6 8 8 9 9 9 13 13 16 10 10 8 7 6 6 6 8 10 10 10 10 10 8 8 8 8 8 6 6 6 6 6 8 9 11 11 9 9 9 9 10 10 8 8 8 8 10 8 8 8 13 11 6 6 6 6 8 8 10 10 10 10 10 10 9 10 10 7 7 8 8 6 10 6 6 8 8 10 13 11 9 8 8 8 8 10 10 8 8 10 10 9 9 9 12 10 8 8 6 6 8 8 10 10 11 11 9 9 9 9 8 8 8 8 8 8 8 10 10 10 8 8 8 8 8 8 8 6 6 8 8 16 11 11 11 11 11 15 12 13 13 7 7 6 6 8 8 10 8 8 8 9 9 11 10 11 8 8 8 8 8 8 8 9 10 8 8 8 8 8 8 9 8 8 8 8 8 8 12 12 11 11 8 8 8 8 8 8 8 8 9 11 11 11 11 15 13 8 8 8 8 8 8 9 9 9 9 9 13 13 10 8 8 6 6 8 12 16 22 21 8 8 8 8 8 8 8 8 8 8 9 9 9 9 15 10 10 8 8 10 8 10 10 13 8 6 6 6 6 6 6 6 6 6 6 6 8 8 8 10 8 8 8 8 8 8 8 6 6 8 10 8 8 8 8 8 10 10 10 8 8 8 6 8 8 9 9 9 9 10 12 9 8 8 8 8 8 9 9 9 9 9 6 6 6 6 8 6 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 8 11 11 11 11 11 10 8 8 6 6 6 7 10 11 12 16 10 10 9 8 6 8 6 6 8 8 10 11 11 11 11 8 8 8 8 12 9 9 7 10 8 11 11 8 8 8 8 8 8 11 8 8 8 10 10 10 8 8 12 15 6 6 6 7 7 12 12 14 17 10 10 6 6 6 6 8 8 8 8 8 8 9 8 8 6 6 8 8 8 7 8 8 8 10 10 10 8 6 6 6 6 6 6 6 6 6 6 8 8 13 8 8 6 6 8 8 8 6 6 6 6 6 7 8 8 10 11 9 9 6 6 6 6 11 8 8 8 8 8 8 8 6 11 13 10 10 6 6 6 6 6 6 9 8 7 6 6 8 8 10 10 10 11 9 9 9 11 11 10 10 8 8 8 8 8 8 8 10 8 8 6 6 6 6 8 8 8 9 9 10 10 10 7 6 6 7 8 8 8 8 8 8 8 3 0 3 8 8 8 8 8 6 6 6 10 9 8 10 8 6 6 6 8 8 8 8 10 8 8 12 10 8 6 6 7 8 8 8 10 10 8 9 6 6 7 6 6 6 8 8 8 8 8 8 10 10 9 11 11 10 10 9 9 8 8 6 6 6 6 9 10 10 6 6 6 6 6 10 8 8 8 10 8 8 8 6 6 6 6 8 6 6 6 6 6 6 8 8 8 8 8 11 11 10 8 8 8 8 8 8 7 6 7 6 8 6 6 6 6 6 9 10 16 16 11 12 12 12 8 9 8 8 8 8 11 11 11 8 6 6 8 8 8 6 6 8 8 6 6 6 6 8 6 6 6 6 8 9 10 10 9 9 9 9 9 9 8 8 8 8 8 10 6 6 6 6 6 6 8 8 10 10 11 11 10 12 7 9 9 7 6 8 11 10 11 9 9 8 10 8 8 9 9 11 8 8 8 8 8 8 8 8 8 8 8 8 11 10 10 8 8 8 8 13 12 10 11 11 8 8 8 8 8 8 11 12 9 9 8 8 8 8 6 6 6 8 12 8 8 8 8 8 8 8 12 12 10 9 9 10 12 12 12 8 10 10 8 8 8 13 12 8 6 6 6 8 8 6 6 8 6 6 8 8 9 9 8 8 10 10 10 12 9 9 12 12 10 9 8 8 8 8 8 8 8 6 6 6 6 7 6 9 9 6 7 6 6 6 6 6 6 6 6 6 8 8 8 6 6 6 6 6 8 8 8 10 8 8 8 8 10 8 8 8 6 7 6 6 8 8 8 10 10 12 11 8 7 8 10 8 7 7 8 8 9 8 8 7 7 7 8 10 10 10 10 12 14 9 9 7 13 10 10 11 12 8 8 8 6 6 6 6 11 6 8 8 8 8 8 6 6 8 8 6 6 8 7 6 6 6 6 6 8 8 6 6 6 8 8 8 8 10 8 6 6 7 6 6 6 6 6 8 10 10 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 9 7 8 8 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no352_i02.b1 MSMg01no352_i02.b1 CHROMAT_FILE:
MSMg01no352_i02.b1 PHD_FILE: MSMg01no352_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:04 2005
         (154 letters)



>mm_chr7_135915385_135915938
          Length = 554

 Score =  248 bits (128), Expect = 2e-70
 Identities = 145/151 (96%), Gaps = 2/151 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccttaattgtc-tggcagtgtatcttgtgatagctaaaaactgacttttcctcag 63
           |||||||||| ||| | ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 205 gaattccttagttg-catggcagtgtatcttgtgatagctaagaactgacttttcctcag 263

                                                                       
Query: 64  gatcatcttatactgttgtggtgtttcataggagcagaaaaaagcagcagaagaaaagaa 123
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 264 gatcatcttatactgttgtggtgtttcataggagcagaaaaaagcagcagcagaaaagaa 323

                                          
Query: 124 ggcagcgctggctgctttgacnaaaggacaa 154
           ||||||||||||||||||||| |||||||||
Sbjct: 324 ggcagcgctggctgctttgacaaaaggacaa 354


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 154
Length of database: 554
Length adjustment: 8
Effective length of query: 146
Effective length of database: 546
Effective search space:    79716
Effective search space used:    79716
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information