Query= MSMg01no352_p19.b1 MSMg01no352_p19.b1 CHROMAT_FILE:
MSMg01no352_p19.b1 PHD_FILE: MSMg01no352_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:43 2005
(407 letters)
>mm_chr7_12890165_12890971
Length = 807
Score = 764 bits (395), Expect = 0.0
Identities = 404/407 (99%)
Strand = Plus / Plus
Query: 1 ggatgaaatattttctggatgacattgggtgtaaacttgtactttacctttatagagtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggatgaaatattttctggatgacattgggtgtaaacttgtactttacctttatagagtat 260
Query: 61 cccggggggtttcactatatacaacatgccttttgagttgtttccaagcggccataatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccggggggtttcactatatacaacatgccttttgagttgtttccaagcggccataatca 320
Query: 121 gctcaagcaccaccaaatggatgaagtttaaacacaaagccatcaagtacatgggtcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctcaagcaccaccaaatggatgaagtttaaacacaaagccatcaagtacatgggtcctt 380
Query: 181 cctgctcactcagttggcctatgaatctgcttctgaatgtcatgatacttgtgacagtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgctcactcagttggcctatgaatctgcttctgaatgtcatgatacttgtgacagtga 440
Query: 241 caagctctttcaacagaaggaatgccactaagaaactgacctatgggtactgctcagcat 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagctctagcaacagaaggaatgccactaagaaactgacctatgggtactgctcagcat 500
Query: 301 ctgtttctggcactattgcaactcccttgtatatgctcttgctcagcttaactgatgttc 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 ctgtttctggcactattgcaactcccttgtatatgctcttgctcagcttcactgatgttc 560
Query: 361 tgtgtttgagtctcatgtcctgggccagtgtcttcatgctgagcatc 407
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtgtttgagtctcatgtcctgggccagtgtcttcatgctgagcatc 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_p19.g1 MSMg01no352_p19.g1 CHROMAT_FILE:
MSMg01no352_p19.g1 PHD_FILE: MSMg01no352_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:43 2005
(346 letters)
>mm_chr7_13081242_13081988
Length = 747
Score = 598 bits (309), Expect = e-175
Identities = 330/337 (97%), Gaps = 1/337 (0%)
Strand = Plus / Minus
Query: 1 ctcaggagtttataaatctaagaaatggggcttgtttggggtattaaaatgcaagatcta 60
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |
Sbjct: 514 ctcaggagtttataaatctaagaaatggagcttgtttgggatattaaaatgcaagatcca 455
Query: 61 tatcattttggcagaatgattctgaatacatcttttcactcttttacagaggtcatatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tatcattttggcagaatgattctgaatacatcttttcactcttttacagaggtcatatta 395
Query: 121 gtattttatccaggagtctttgcaaaaatcacaataaaaa-gtcatcaattactttctgc 179
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 394 gtattttatccaggagtctttgcaaaaatcacaataaaaaggtcatcaattactttttgc 335
Query: 180 cataacatttattaagtgactattagaccctgcaaaggcgggcactaaatgttacatcct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cataacatttattaagtgactattagaccctgcaaaggcgggcactaaatgttacatcct 275
Query: 240 aagttacctgaagctctaagagtcagcagtgaacatagtgtcttaacactagtatgctac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aagttacctgaagctctaagagtcagcagtgaacatagtgtcttaacactagtatgctac 215
Query: 300 caatttttatcacagtgtgtgtgtgtgtgtgtttgtg 336
||||||||| |||||||||||||||||||||| ||||
Sbjct: 214 caatttttaccacagtgtgtgtgtgtgtgtgtgtgtg 178
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 747
Length adjustment: 9
Effective length of query: 337
Effective length of database: 738
Effective search space: 248706
Effective search space used: 248706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
