Query= MSMg01no355_c15.b1 MSMg01no355_c15.b1 CHROMAT_FILE:
MSMg01no355_c15.b1 PHD_FILE: MSMg01no355_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:32 2005
(602 letters)
>mm_chr7_137364718_137365720
Length = 1003
Score = 946 bits (489), Expect = 0.0
Identities = 521/533 (97%), Gaps = 5/533 (0%)
Strand = Plus / Minus
Query: 75 gctcctcctgtccctggccttttgttcttggtcagctagagagacccagaagaggaacat 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 gctcctcctgtccctggccttttgttcttggtcagctagagagacccagaagaggaacat 944
Query: 135 accccaagagcaagatttaggacccagtggacggctgaggagacattctctttctggtca 194
| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 943 atccctagagcaagatttaggacccagtggacagctgaggagacattctctttctggtca 884
Query: 195 tgtagctacgtatttctctgcacgcacacacaca---a-gtgtttggatgccggaggctg 250
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 883 tgtagctacgtatttctctgcacgcacacacacacacacgtgtttggatgccggaggctg 824
Query: 251 acatcaagtgtcttcctcaatcactttttatcttatttagtgagacaaggtctctcactg 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 acatcaagtgtcttcctcaatcactttttatcttatttagtgagacaaggtctctcactg 764
Query: 311 aatctaacttgctggttggtctgactggatattttctgaggacaagatacccagaagaag 370
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 aatctaacttgctggttggcctgactggatattttctgaggacaagatacccagaagaag 704
Query: 371 cgttacacagttaaacaacagcaacaacaagcaaaagtgtcattagttttaat-gggtgc 429
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 703 cgttacacagttaaacaacagcaacaacaagcaaaagtgtcattagttttaatggggtgc 644
Query: 430 ctccgccttacccctcagactggtttctctggttttgtgtcgccgttcccctttggtgtc 489
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ctccgccttatccctcagactggtttctctggttttgtgtcgccgttcccctttggtgtc 584
Query: 490 tccgttcccttgtattcacttaccgtgttctctagagacaccgatcttcctaatttctgt 549
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 583 tgcgttcccttgtattcacttaccgtgttctctagtgacaccgatcttcctaatttctgt 524
Query: 550 taatcagctgctgaacaagtatctcattattgttttaatttgcattcccttga 602
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 taatcagctgctgaacaagtatctcattattgttttaatttgcattcccttga 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1003
Length adjustment: 10
Effective length of query: 592
Effective length of database: 993
Effective search space: 587856
Effective search space used: 587856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_c15.g1 MSMg01no355_c15.g1 CHROMAT_FILE:
MSMg01no355_c15.g1 PHD_FILE: MSMg01no355_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:32 2005
(516 letters)
>mm_chr7_137279454_137280369
Length = 916
Score = 882 bits (456), Expect = 0.0
Identities = 498/514 (96%), Gaps = 5/514 (0%)
Strand = Plus / Plus
Query: 1 ctaattacaggaacacacatacacacacacacacacacacacacacacacgtagcctgga 60
||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctaatcacaggaacac----acacacacacacacacacacacacacacacgtagcctgga 260
Query: 61 caagaagaactggggcaccctctagatcctcactgagaatataagaagccatgggaagtg 120
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 caagaagagctggggcaccctctagatcctcactgagaatataagaagccacgggaagtg 320
Query: 121 acatccattgttcttgtttcatcttggcctagaccccagccctgtgctgctgctgaagat 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 acatccattgttcttgtttcatcttggcctagaccccagccccgtgctgctgctgaagat 380
Query: 181 gggcaaagcaatatgccctcattgaacaaagccatctatcattcaagagtcctctagaaa 240
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 381 gggcaaagcaatatgccctcattgaacaaagccaactgtcattcaagagtcctctagaaa 440
Query: 241 ttagtcacacccccaggaagctagcaccacaaccctagctttcaccacggcagcccctgg 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 ttagtcacacccccaggaagctagcaccacaaccctagctttcaccaaggcagcccctgg 500
Query: 301 gatgctaaggttgatgggagaaatactgtgtgtcaggagaatggtgtgtaagtggaacca 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatgctaaggttgatgggagaaacactgtgtgtcaggagaatggtgtgtaagtggaacca 560
Query: 361 ggtttcagagtggaacagtttgcagtgtggcggcccactcagaacactggtctggaagct 420
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 561 ggtttcagagtggaacagtttgcagtgtggcagcccactcagaacactggtctggaagtt 620
Query: 421 tgcattgaccctcaagccacacaggatccctgatcatgcatgacccagcttgaccttagc 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 tgcattgaccctcaagccacacagaatccctgatcatgcatgacccagcttgaccttagc 680
Query: 481 cttgggggtttcattttattttatttttttattt 514
||||||||||||||||||||||||||||| ||||
Sbjct: 681 cttgggggtttcattttattttatttttt-attt 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
