NNATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAAGTCCTAGATGTGGAGAAGCAGCTTTCTTCTGCTTATGCAC
AGACACTTTCTTAATTGCTAGTTACTAAAAATATGGCATCCTTCATTTAC
ATCTGATTCAATTGCTTCTGAGAAGTCCTTCATCATGTACAGCCTTGGAA
GTGTCAAATCCTGTAGAGTCAGTAATCTATATGAAGTCATTAACATTTAC
AGAGTCTTTTTATAAAAGGCAGGGGTTATCTTTTTCCATGTACTGTGTGC
ATAGATGACCTGATATCTCACAGCCTTTTGATAACCACACTAACTCCATC
CTTCTCTAATTTTTTATGACAATGAATATGTCTGAGCTATAACTTGTTTT
GTTAATGTGCAAAGAAAAGATGGTTTCTCATTAGGCATCTGCTAGATAAC
ATTTTGCACATCGGCAAAGTACTTTGCTTGTCACATACACATTCAAGAAA
AGTTGATTTGAATTCAATCAGATCCTCAGCATAACTCTTGTTTTCTTCAG
AAAACTAAAAACAAAAGCTACCCCCTGCCCAGAAGAAAAACAAGTGAAAA
CAAAAGCCTTAGCTATTTCAAAGCTGATAGTCTCCTCTACATCATTAGGA
GTATGTCTTACAACATTAACTTTGTGGAAGAAAGATGGCAAATTGTAGTG
CCTGTTATTCATTTCACTGGACTGGATGTTGAAAAAAAAGATTTCCTATG

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGG
CAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATG
CAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAA
GATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAG
GAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGG
AAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGA
TCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTA
AGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCC
AGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAA
NATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTANAAAGAATG
AATTTATGAAATTCCTAGCCAAATGGATGGACCTTGAGGGCATCATCCTG
ATTGAGGGAACACTTTTCCAAAGAAATCCCCCATATGGACTCCCTGAAAA
GGGGTATTAGTCCCCAACCTAGGATTCCCACAAAATAAAAAAAATTTTTT
AACACCTGGAACTCCCAAAAAAAAGAAACTGGAATGGGGCACCTATCCCC
CTCCCTAAAATGG

Query= MSMg01no355_i23.b1 MSMg01no355_i23.b1 CHROMAT_FILE:
MSMg01no355_i23.b1 PHD_FILE: MSMg01no355_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:02 2005
         (562 letters)



>mm_chr7_98498831_98499794
          Length = 964

 Score =  998 bits (516), Expect = 0.0
 Identities = 549/560 (98%), Gaps = 2/560 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaagtcc-tagatgtggagaagcagctttcttctgcttatgcacagacactttct 63
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagtccaaagatgtggagaagcagctttcttctgcttatgcacagacactttct 264

                                                                       
Query: 64  taattgctagttactaaaaatatggcatccttcatttacatctgattcaattgcttctga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 265 taattgctagttactaaaaatatggcatccttcatttacatctgattcaattgcttctgg 324

                                                                       
Query: 124 gaagtccttcatcatgtacagccttggaagt-gtcaaatcctgtagagtcagtaatctat 182
           ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 325 gaagtccttcatcatgtacagccttggaagtggtcaagtcctgtagagtcagtaatctat 384

                                                                       
Query: 183 atgaagtcattaacatttacagagtctttttataaaaggcaggggttatctttttccatg 242
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 385 atgaagtcattaacatttacagagtctttttataagaggcaggggttatctttttccatg 444

                                                                       
Query: 243 tactgtgtgcatagatgacctgatatctcacagccttttgataaccacactaactccatc 302
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 tactgtgtgcatagatgacctgatatctcatagccttttgataaccacactaactccatc 504

                                                                       
Query: 303 cttctctaattttttatgacaatgaatatgtctgagctataacttgttttgttaatgtgc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 505 cttctctaattttttatgacaatgaatatgtctgagctataacttgttttgttaaagtgc 564

                                                                       
Query: 363 aaagaaaagatggtttctcattaggcatctgctagataacattttgcacatcggcaaagt 422
           ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 565 aaagaaaaggtggtttctcattaggcatctgctagataacattttgcacatcagcaaagt 624

                                                                       
Query: 423 actttgcttgtcacatacacattcaagaaaagttgatttgaattcaatcagatcctcagc 482
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 625 actttgcttgtcacatacacattcgagaaaagttgatttgaattcaatcagatcctcagc 684

                                                                       
Query: 483 ataactcttgttttcttcagaaaactaaaaacaaaagctaccccctgcccagaagaaaaa 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ataactcttgttttcttcagaaaactaaaaacaaaagctaccccctgcccagaagaaaaa 744

                               
Query: 543 caagtgaaaacaaaagcctt 562
           ||||||||||||||||||||
Sbjct: 745 caagtgaaaacaaaagcctt 764


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 964
Length adjustment: 10
Effective length of query: 552
Effective length of database: 954
Effective search space:   526608
Effective search space used:   526608
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)