Query= MSMg01no356_i14.b1 MSMg01no356_i14.b1 CHROMAT_FILE:
MSMg01no356_i14.b1 PHD_FILE: MSMg01no356_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:17 2005
(513 letters)
>mm_chr7_62068681_62069592
Length = 912
Score = 977 bits (505), Expect = 0.0
Identities = 511/513 (99%), Gaps = 1/513 (0%)
Strand = Plus / Plus
Query: 1 tcttagctcctttgtgtgacttttatttttatccttttgcaaaatgaggtttataacggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttagctcctttgtgtgacttttatttttatccttttgcaaaatgaggtttataacggt 260
Query: 61 ggctttcttcagtgatggtgaaaatatgcttttcaaagacatggagagctatataaatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctttcttcagtgatggtgaaaatatgcttttcaaagacatggagagctatataaatgc 320
Query: 121 aaagtagttgcaggcaggtttagataatgttcagtgctctctgttagctttcataaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagtagttgcaggcaggtttagataatgttcagtgctctctgttagctttcataaaact 380
Query: 181 gtgacaatgtctgcgcatttgttgtatcgcctagtatgcatatacgtgttattaaacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgacaatgtctgcgcatttgttgtatcgcctagtatgcatatacgtgttattaaacaaa 440
Query: 241 agagcacagtctttaatctatggtgtctcctagaacaggtgcaaagcatttgtttatttt 300
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agagcacagtctttaaac-atggtgtctcctagaacaggtgcaaagcatttgtttatttt 499
Query: 301 cttggcaaaaatattgagaaacatggaaattaaaacctgctgctaattttaaaaattcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cttggcaaaaatattgagaaacatggaaattaaaacctgctgctaattttaaaaattcat 559
Query: 361 tccttgtaatttttctcttccttttcctgctgcttcactgaagcctagagaagcctttgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tccttgtaatttttctcttccttttcctgctgcttcactgaagcctagagaagcctttgg 619
Query: 421 acatttctcatcctagggacaagtttccccattgtccacaggccgagcttgtgttaaagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 acatttctcatcctagggacaagtttccccattgtccacaggccgagcttgtgttaaagc 679
Query: 481 tagcaagtgtccttctggacttagactctgcat 513
|||||||||||||||||||||||||||||||||
Sbjct: 680 tagcaagtgtccttctggacttagactctgcat 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 912
Length adjustment: 10
Effective length of query: 503
Effective length of database: 902
Effective search space: 453706
Effective search space used: 453706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_i14.g1 MSMg01no356_i14.g1 CHROMAT_FILE:
MSMg01no356_i14.g1 PHD_FILE: MSMg01no356_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:17 2005
(393 letters)
>mm_chr7_62299513_62300305
Length = 793
Score = 706 bits (365), Expect = 0.0
Identities = 387/395 (97%), Gaps = 2/395 (0%)
Strand = Plus / Minus
Query: 1 ccactttcctttctcttatgaagtaatgaaatccaggtctatggctatacacatatttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ccactttcctttctcttatgaagtaatgaaatccaggtctatggctatacacatatttcc 424
Query: 61 gtgactatttctggacaaataatattctaatagatgaagacagtgtattaaaactattga 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 423 ttgactatttctggacaaataatattctaataaatgaagacagtgtattaaaactattaa 364
Query: 121 gataatttcaatatgtgatagtaagcttgcagtctctgaaacatgttagtttatccaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gataatttcaatatgtgatagtaagcttgcagtctctgaaacatgttagtttatccaggc 304
Query: 181 atttgatatttatttatacttccacatagaatggacactgtcttccccttttagaaaatg 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 303 atttgatatttatttatacttccacatagaacggacactgtcttccccttttagacaatg 244
Query: 241 catgtgaatgtcacaggactggaatctgtattactcagtacagtattgctgtgatggtga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 catgtgaatgtcacaggactggaatctgtattactcagtacagtattgctgtgatggtga 184
Query: 301 ccatgaccaaaacattgg--gaggaaagggtttcattctttttataatttgtaattcatc 358
|||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 183 ccatgaccaaaacattgggagaggaaagggtttcattctttttatagtttgtaattcatc 124
Query: 359 atccagggaagttagagcaagaatttaaggcagaa 393
|||||||||||||||||||||||||||||||||||
Sbjct: 123 atccagggaagttagagcaagaatttaaggcagaa 89
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
