Query= MSMg01no356_l16.b1 MSMg01no356_l16.b1 CHROMAT_FILE:
MSMg01no356_l16.b1 PHD_FILE: MSMg01no356_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:32 2005
(545 letters)
>mm_chr7_62242778_62243723
Length = 946
Score = 986 bits (510), Expect = 0.0
Identities = 534/542 (98%), Gaps = 1/542 (0%)
Strand = Plus / Minus
Query: 5 gaattcttcaag-atatgcatggagtaaataactgcagatggacaaatcttcacatctac 63
|||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 746 gaattcttcaagaatatgcatgaagtaaataactgcagatggacaaatcttcacatctgc 687
Query: 64 accattacaacttacagctcaataagggttgtgtgtagaagaaattttaaattgatctct 123
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 686 accattacaacttacagctcagtaagggttgtgtgtagaagaaattttaaattgatctct 627
Query: 124 ggaataccttagcagtggactatcagtataagatggttagcagaagctggaaggcagcaa 183
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ggaataccttagcagtacactatcagtataagatggttagcagaagctggaaggcagcaa 567
Query: 184 aatgcaatctagctgattattacaaagcagaatattaggtgtgcatatatattaaactca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aatgcaatctagctgattattacaaagcagaatattaggtgtgcatatatattaaactca 507
Query: 244 catacttttataatgtccacacattaaagtatgtgaatgatcattgagaacacataactt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 catacttttataatgtccacacattaaagtatgtgaatgatcattgagaacacataactt 447
Query: 304 tgtaaagtctaaaaattatgtttgttatattctgaaagtcacacaatagtggccaaacct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgtaaagtctaaaaattatgtttgttatattctgaaagtcacacaatagtggccaaacct 387
Query: 364 ttgaatgacataagaattaatatgaattccattatctcaaatctggatatgttacctgca 423
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ttgagtgacataagaattaatatgaattccattatctcaaatctggatatgttacctgca 327
Query: 424 acttgataccagactgtggtgaagcctttttgcttgtgagaaatgtcatcttttatcaga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 acttgataccagactgtggtgaagcctttttgcttgtgagaaatgtcatcttttatcaga 267
Query: 484 cctgagttctaccagctggaccctataggagtgagattctgcttagaagattatactgtg 543
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 266 cctgagttctaccagctggaccctataggaatgagattctgcttagaagattatactgtg 207
Query: 544 ac 545
||
Sbjct: 206 ac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 946
Length adjustment: 10
Effective length of query: 535
Effective length of database: 936
Effective search space: 500760
Effective search space used: 500760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_l16.g1 MSMg01no356_l16.g1 CHROMAT_FILE:
MSMg01no356_l16.g1 PHD_FILE: MSMg01no356_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:32 2005
(393 letters)
>mm_chr7_62091558_62092350
Length = 793
Score = 716 bits (370), Expect = 0.0
Identities = 385/390 (98%)
Strand = Plus / Plus
Query: 4 ccccccgtgaagcatattctaatgttcagggagccagagaaagctaagagttgtgcagta 63
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 204 ccccccgtgaagcatattctaacgttcagggagccagagaaagctaagacttgtgcagta 263
Query: 64 gtccccaaactcctccggtgaccgtggcctgactgaggtcttgagtgggcttggtggcag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtccccaaactcctccggtgaccgtggcctgactgaggtcttgagtgggcttggtggcag 323
Query: 124 gtgacttactttggctgtgttttgagcaggcttcagatttaaagttacaagacagtcctg 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 324 gtgacttactttggctgtgttttgagcaggcttcagatttaaagttacaagacagtactg 383
Query: 184 aagcagaaaagaacctagttgggaacaatcgggcactgtgctccatcactggccacagag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aagcagaaaagaacctagttgggaacaatcgggcactgtgctccatcactggccacagag 443
Query: 244 gagaatttcagtcccagtacagaggacctatttttattggagatttcaaacaggctgact 303
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 444 gagaatttcagtcccagtacagaggacctatttttattggagatttcaaacacgctgact 503
Query: 304 gagaagtgctttgtgactactgctggggatccagtctcagagttggtgatggggttgctt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 504 gagaagtgctttgtgactactgctggggatccagtctcagagttggtgatgggtttgctt 563
Query: 364 tcttctcccacaagcacagcacaagggtgg 393
||||||||||||||||||||||||||||||
Sbjct: 564 tcttctcccacaagcacagcacaagggtgg 593
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
