Query= MSMg01no356_m05.b1 MSMg01no356_m05.b1 CHROMAT_FILE:
MSMg01no356_m05.b1 PHD_FILE: MSMg01no356_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:35 2005
(431 letters)
>mm_chr7_36787441_36788271
Length = 831
Score = 772 bits (399), Expect = 0.0
Identities = 420/427 (98%)
Strand = Plus / Plus
Query: 4 ggaattcccatcccatcctcctttactaactgtttaaatttgtctcatttcttttctatg 63
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcccatcccattatcctttactaactgtttaaatttgtctcatttcttttctatg 263
Query: 64 tgtatatagccatgattagtctatatataaatatgtaattagtatactaattatactaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtatatagccatgattagtctatatataaatatgtaattagtatactaattatactaat 323
Query: 124 gttaataattaccatatgtatgctaataattggtgaatattagtatgcacactaatactt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gttaataattaccatatgtatgctaataattggtgaatattagtatgcacactaatactt 383
Query: 184 cttctaaccatttgagaataagcagggacaattccccttctagcccattatccacatttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cttctaaccatttgagaataagcagggacaattccccttctagcccattatccacatttc 443
Query: 244 attctgctggttatccaaatattgtcctttaggattttagtgatctttgctcctgcagta 303
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 444 attctgctggttatccaaatattgtcctttaggacaatagtgatctttgctcctgcagta 503
Query: 304 tatggtccaggcccatgtactgcactgaagtgactggtctttgaagcctcctcagccttt 363
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tatggtccaggcccaggtactgcactgaagtgactggtctttgaagcctcctcagccttt 563
Query: 364 cttgcccttctatcttggagagcacaggccactttctctcatttgaggctatatctcaaa 423
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 564 cttgcccttctatcttggagagcacaggccactttctctcatttgaggctatgtctcaaa 623
Query: 424 gcttatg 430
|||||||
Sbjct: 624 gcttatg 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_m05.g1 MSMg01no356_m05.g1 CHROMAT_FILE:
MSMg01no356_m05.g1 PHD_FILE: MSMg01no356_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:35 2005
(247 letters)
>mm_chr7_36962198_36962841
Length = 644
Score = 451 bits (233), Expect = e-131
Identities = 243/247 (98%), Gaps = 3/247 (1%)
Strand = Plus / Minus
Query: 1 acagattcagttttaaagccagtaagaggaaccttagggaaggataggtgatctatatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acagattcagttttaaagccagtaagaggaaccttagggaaggataggtgatctatatct 385
Query: 61 tgattggtgggttctatctctgggggtactgggtgatgctatgattggttagagtcttgc 120
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 384 tgattggtgggttctatctctgggggtactgggtgatgctatgattggtt--agtcttgc 327
Query: 121 ttcgagcatctttgactattttttgctttattcaagggaggttagctcttggcctaactc 180
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttcaagcatctttgacta-tttttgctttattcaagggaggttagctcttggcctaactc 268
Query: 181 ttgactatgagcttggctaactgtccaagctggggaggggtaaataagcctgcagttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttgactatgagcttggctaactgtccaagctggggaggggtaaataagcctgcagttgtt 208
Query: 241 ccagtaa 247
|||||||
Sbjct: 207 ccagtaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 644
Length adjustment: 9
Effective length of query: 238
Effective length of database: 635
Effective search space: 151130
Effective search space used: 151130
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
