Query= MSMg01no356_o11.b1 MSMg01no356_o11.b1 CHROMAT_FILE:
MSMg01no356_o11.b1 PHD_FILE: MSMg01no356_o11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:46 2005
(414 letters)
>mm_chr7_105923725_105924541
Length = 817
Score = 739 bits (382), Expect = 0.0
Identities = 405/414 (97%), Gaps = 3/414 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctctgcttctcggtgactcagggacaactgtaatgctcgcccaggcagaatag 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ggaattcctctgcttcttggtgactcagggacaactgtaatgctcgcccaggcagaatag 558
Query: 64 gtcctgatgtggccaggggcccccagagaccaccgtcagtcttgctttccatgagcacca 123
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 557 gtcctgatgtggccaggggcccccagagaccaccttcagtcttgctttccatgagcacca 498
Query: 124 gggtgccagagaaataaactgatgctggggtcaaaactgttgctatacg---tgatggct 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 497 gggtgccagagaaataaactgatgctggggtcaaaactgttgctatacgtgatgatggct 438
Query: 181 tcacactggcaatggaagtggtaacctttttctcggacagtgacactggggtagtatata 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tcatactggcaatggaagtggtaacctttttctcggacagtgacactggggtagtatata 378
Query: 241 aagggggagtctccatgcttttctgtgcggtctgtgtatgctctaaatgatccacagtga 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aagggggaatctccatgcttttctgtgcggtctgtgtatgctctaaatgatccacagtga 318
Query: 301 aaggcttggaatgttcatctcaaatataaccagcagtttgcagctttcagtcagacttca 360
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 317 aaggtttggaatgttcatctcaaatataaccagcactttgcagctttcagtcagacttca 258
Query: 361 ccaggagcccttcagctcatctaactttgcccacctcagacaatctctagttgt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ccaggagcccttcagctcatctaactttgcccacctcagacaatctctagttgt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 817
Length adjustment: 9
Effective length of query: 405
Effective length of database: 808
Effective search space: 327240
Effective search space used: 327240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_o11.g1 MSMg01no356_o11.g1 CHROMAT_FILE:
MSMg01no356_o11.g1 PHD_FILE: MSMg01no356_o11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:46 2005
(523 letters)
>mm_chr7_105735923_105736845
Length = 923
Score = 1004 bits (519), Expect = 0.0
Identities = 522/523 (99%), Gaps = 1/523 (0%)
Strand = Plus / Plus
Query: 1 taatggctttgccgaagtacatcattatctctaaatattcttcagagatagcttgcaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatggctttgccgaagtacatcattatctctaaatattcttcagagatagcttgcaatt 260
Query: 61 acttttaatttatggacttaaacataaaacaaagaaatagtgctatcaacttcagcaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttttaatttatggacttaaacataaaacaaagaaatagtgctatcaacttcagcaaaa 320
Query: 121 gcatgtctaaggatggatccagacatgttctgtcattgtcaatccacttaagaaagggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatgtctaaggatggatccagacatgttctgtcattgtcaatccacttaagaaagggcc 380
Query: 181 tggagagatggctctagtagttaagagtcatctagagccatggtagctgatctaacaggg 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggagagatggctc-agtagttaagagtcatctagagccatggtagctgatctaacaggg 439
Query: 241 cctggtttcaattcccagcactcacatggtatctcacattgtctgtaacttcagtcccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cctggtttcaattcccagcactcacatggtatctcacattgtctgtaacttcagtcccag 499
Query: 301 ggaatccatgggtaggcactgaatgtatatggtgcaccagaaatgtataggccaaacact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggaatccatgggtaggcactgaatgtatatggtgcaccagaaatgtataggccaaacact 559
Query: 361 cacacatgtaaaataagggttggggggaacctggagaatgtctaagaaactcagtgctgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cacacatgtaaaataagggttggggggaacctggagaatgtctaagaaactcagtgctgg 619
Query: 421 ccctggggagataggtcagtacagtgcttgccacacaaacagaaaccagctctcacatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ccctggggagataggtcagtacagtgcttgccacacaaacagaaaccagctctcacatga 679
Query: 481 aaagccaggccatgacttgtgcctataaccccagcactgggga 523
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaagccaggccatgacttgtgcctataaccccagcactgggga 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
