Query= MSMg01no356_o15.b1 MSMg01no356_o15.b1 CHROMAT_FILE:
MSMg01no356_o15.b1 PHD_FILE: MSMg01no356_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:46 2005
(485 letters)
>mm_chr7_86340389_86341273
Length = 885
Score = 901 bits (466), Expect = 0.0
Identities = 482/490 (98%), Gaps = 5/490 (1%)
Strand = Plus / Minus
Query: 1 catcactgatctgtgaacagtgtccctgtctgcagggacatctgcagactttttcttgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 catcactgatctgtgaacagtgtccctgtctgcagggacatctgcagactttttcttgtc 815
Query: 61 attattcaccaaacaatacaagtacaataactgtttacatagcacttccattgtatttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 attattcaccaaacaatacaagtacaataactgtttacatagcacttccattgtatttgg 755
Query: 121 tgttacaaatcaactacacaggaaactgtggatggcttacatacaggtactacccagttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 tgttacaaatcaactacacaggaaactgtggatggcttacatacaggtactacccagttt 695
Query: 181 cacataaggggtctgaacatccttagattttggtatctgagaaagcctctgtaaccaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 cacataaggggtctgaacatccttagattttggtatctgagaaagcctctgtaaccaatc 635
Query: 241 aatctccagggatcctaaagatgatttttctaacagtatgcaagtatgcaaggccacact 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 634 aatctccagggatcctaaagatgatttttctaagagtatgcaagtatgcaaggccacact 575
Query: 301 acggtccttaagtcttggctggtgacaaaaagtaggctagcatctcaagaagacttgatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 acggtccttaagtcttggctggtgacaaaaagtaggctagcatctcaagaagacttgatg 515
Query: 361 cttaaggtcatgggcacagtgtttttaaaggttgaaaaaaaaaaaaaa-----ccaaccc 415
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 514 cttaaggtcatgggcacagtgtttttaaaggttgaaaaaaaaaaaaaaccaacccaaccc 455
Query: 416 aacccaacccaacctaaaacaactaccactaccaccaccaccaccaccaccaccaccacc 475
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 454 aacccaacccaacccaaaacaaccaccactaccaccaccaccaccaccaccaccaccacc 395
Query: 476 accaccacca 485
||||||||||
Sbjct: 394 accaccacca 385
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_o15.g1 MSMg01no356_o15.g1 CHROMAT_FILE:
MSMg01no356_o15.g1 PHD_FILE: MSMg01no356_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:46 2005
(452 letters)
>mm_chr7_86154478_86155329
Length = 852
Score = 756 bits (391), Expect = 0.0
Identities = 437/453 (96%), Gaps = 2/453 (0%)
Strand = Plus / Plus
Query: 1 tcctgtagtgacttgcttttcttacagttcccagaacaatttatttttaattgacagcta 60
|||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 201 tcctgtagtgacttgcttttcttaaagttcccaaaacaatttatttttaatcgacagcta 260
Query: 61 tattattttcttattcattctaagtatgtaataacatgaataagtatcactgacctacat 120
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 tattgttttcttattcattctaagtatgtaataacatgaataagtatcactgacgtacat 320
Query: 121 atatatgggaaacaagcacagatgattcttgctcactgccaacaacaacaaaaatcacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatatgggaaacaagcacagatgattcttgctcactgccaacaacaacaaaaatcacag 380
Query: 181 gagag--ctgggatgatacactcctagagtcccagcacacagaaggctgaagcaggagga 238
||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 381 gagagagctgggatgatacactcctagagtcccagcacgcagaaggctgaggcaggagga 440
Query: 239 tttaaaaatcaacattagcctaggttacagagcatagccctgtcctcaaatatcaagggc 298
||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 441 tttaaaactcaacgttagcctaggttacagagcatagccctgtcctcaaatgtcaagagc 500
Query: 299 tggagatgtagcgtggggtacagtacttgcttaatgtgtaaagctcagttatatcaacag 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggagatgtagcgtggggtacagtacttgcttaatgtgtaaagctcagttatatcaacag 560
Query: 359 tggggtagggagagagaagagacagaaagagggatctaggagaattgagggaagaaggca 418
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 tggggtggggagagagaagagacagaaagggggatctaggagaattgagggaagaaggca 620
Query: 419 aggatagagaggaggaaggaagggaaagagaga 451
|||| ||||||||||||||||||||||||||||
Sbjct: 621 aggagagagaggaggaaggaagggaaagagaga 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
