Query= MSMg01no358_g21.b1 MSMg01no358_g21.b1 CHROMAT_FILE:
MSMg01no358_g21.b1 PHD_FILE: MSMg01no358_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:41 2005
(489 letters)
>mm_chr7_106411866_106412754
Length = 889
Score = 911 bits (471), Expect = 0.0
Identities = 486/493 (98%), Gaps = 4/493 (0%)
Strand = Plus / Minus
Query: 1 tgataatattttaagatcaaaaatatttatttggagtcctagaatttcaaagtaataaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tgataatattttaagatcaaaaatatttatttggagtcctagaatttcaaagtaataaaa 696
Query: 61 caacagagttccagaatcataaaataaatgaaaattagatcaaatataagaagctaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 caacagagttccagaatcataaaataaatgaaaattagatcaaatataagaagctaagaa 636
Query: 121 gctagaaatcacagactcgcatacatgtgt----tctctctctctctctccctctccctc 176
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 635 gctagaaatcacagactcgcatacatatgttctctctctctctctctctccctctccctc 576
Query: 177 tccttccctcccaactggctgttgctagagactatcatagactaaatgtatgtgtgcacc 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tccttccctcccaactggctgttgctagagactatcatagactaaatgtatgtgtgcacc 516
Query: 237 aaacatctatgttaaaaccctaaccaaaggggctatctctagggaaaacacagatgaagt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aaacatctatgttaaaaccctaaccaaaggggctatctctagggaaaacacagatgaagt 456
Query: 297 catgaggatgctaccccaccccacttcagacacatgcccttaaagaagaggaagaggccg 356
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 catgaggatgccaccccaccccacttcagacacatgcccttaaagaagaggaagaggccg 396
Query: 357 gagtcatatgtttgcagcatctgcatagcaggaaatggatcctcacggacaccacttgca 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gagtcatatgtttgcagcatctgcatagcaggaaatggatcctcacggacaccacttgca 336
Query: 417 tcagagctttgatgttgtacttcccacgccctggaactgtgggtaaagagcacttggtgt 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 335 tcagagctttgatgttgtacttcccacgccctggaactgtgggtaaagagcacttgttgt 276
Query: 477 ttcagctcggtat 489
|||||||||||||
Sbjct: 275 ttcagctcggtat 263
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space: 421041
Effective search space used: 421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_g21.g1 MSMg01no358_g21.g1 CHROMAT_FILE:
MSMg01no358_g21.g1 PHD_FILE: MSMg01no358_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:41 2005
(172 letters)
>mm_chr7_106215190_106215761
Length = 572
Score = 325 bits (168), Expect = 9e-94
Identities = 171/172 (99%)
Strand = Plus / Plus
Query: 1 atgactcaagaagaaacagaaaaccaaaacagacttttcatgcataaagaggtaatcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgactcaagaagaaacagaaaaccaaaacagacttttcatgcataaagaggtaatcata 260
Query: 61 agactactgagagaactaaatataaaggcataaaagtgtggaggcaggcagagacttgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agactactgagagaactaaatataaaggcataaaagtgtggaggcaggcagagacttgac 320
Query: 121 tagtcaatcctataattatttaataataatataccaatataccaatgcagct 172
|||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 tagtcaatcctataattatttaatgataatataccaatataccaatgcagct 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 572
Length adjustment: 8
Effective length of query: 164
Effective length of database: 564
Effective search space: 92496
Effective search space used: 92496
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
