Query= MSMg01no358_i24.b1 MSMg01no358_i24.b1 CHROMAT_FILE:
MSMg01no358_i24.b1 PHD_FILE: MSMg01no358_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:51 2005
(442 letters)
>mm_chr7_104667752_104668592
Length = 841
Score = 832 bits (430), Expect = 0.0
Identities = 436/438 (99%), Gaps = 1/438 (0%)
Strand = Plus / Plus
Query: 5 gaattcagagccattctggtttacagatcacattccaggacagtcaaggctacacagaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagagccattctggtttacagatcacattccaggacagtcaaggctacacagaga 264
Query: 65 accctgtttcaggagaaaaaaaagcaaaccagaaagaaagagttagaaagactctttgat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 accctgtttcaggagaaaaaaaagcaaaccagaaagaaagagttagaaagactctttgat 324
Query: 125 cctttctttcttgtatattagttagatgagtgacagacacacagggaaacaatggtttag 184
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 cctttctttcttgtatattagttaaatgagtgacagacacacagggaaacaatggtttag 384
Query: 185 taagacagcagattcaccctcccttagccttaggactaaggtcatcataggtccatgctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taagacagcagattcaccctcccttagccttaggactaaggtcatcataggtccatgctc 444
Query: 245 attttttcctaggtctgtcttctgtctgtgtctgtgttttcccactatctctatttctag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attttttcctaggtctgtcttctgtctgtgtctgtgttttcccactatctctatttctag 504
Query: 305 tctatttttttcctgtgggaagaagaaaaggccttcattctgcatttcttactttgaaag 364
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctatttttt-cctgtgggaagaagaaaaggccttcattctgcatttcttactttgaaag 563
Query: 365 acaggtcccaaaaggtgtatcttccagttttccatagtgttgactggaaacagtcacatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acaggtcccaaaaggtgtatcttccagttttccatagtgttgactggaaacagtcacatg 623
Query: 425 attctctctctcattagg 442
||||||||||||||||||
Sbjct: 624 attctctctctcattagg 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 841
Length adjustment: 9
Effective length of query: 433
Effective length of database: 832
Effective search space: 360256
Effective search space used: 360256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_i24.g1 MSMg01no358_i24.g1 CHROMAT_FILE:
MSMg01no358_i24.g1 PHD_FILE: MSMg01no358_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:52 2005
(445 letters)
>mm_chr7_104889188_104890032
Length = 845
Score = 853 bits (441), Expect = 0.0
Identities = 444/445 (99%)
Strand = Plus / Minus
Query: 1 ttaggagtgcggtgttgtcatgaactcttggacccaggcggtcagaacacggggtttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ttaggagtgcggtgttgtcatgaactcttggacccaggcggtcagaacacggggtttcaa 389
Query: 61 tttcaagctactcactaagcacgttttgctctgtgctgggctctgtgctaaggggttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tttcaagctactcactaagcacgttttgctctgtgctgggctctgtgctaaggggttggt 329
Query: 121 taccatgatttctgaagccaatcaggtgggagagacagagctccacactgctgactggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 taccatgatttctgaagccaatcaggtgggagagacagagctccacactgctgactggag 269
Query: 181 aagcctggggccttctttccagagactcccacgagacaacgctgggattatttaggggca 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 268 aagcctggggccttctttccagagactcccacgagacaacgctggaattatttaggggca 209
Query: 241 gtggtgaaggatttctctatgtagaccaggttgaccttgaactcagagatctgcctgcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gtggtgaaggatttctctatgtagaccaggttgaccttgaactcagagatctgcctgcct 149
Query: 301 ttgcagagattgggatgtgtgctaccggggctggagagatgactcagtagttaagagcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ttgcagagattgggatgtgtgctaccggggctggagagatgactcagtagttaagagcac 89
Query: 361 tgactgctcttcctgagatcctgagttcaattcccagcaaccacatggtggctcacaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tgactgctcttcctgagatcctgagttcaattcccagcaaccacatggtggctcacaatg 29
Query: 421 ggatctgatgccctctcctggtgtg 445
|||||||||||||||||||||||||
Sbjct: 28 ggatctgatgccctctcctggtgtg 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
