Query= MSMg01no358_m14.b1 MSMg01no358_m14.b1 CHROMAT_FILE:
MSMg01no358_m14.b1 PHD_FILE: MSMg01no358_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:08 2005
(519 letters)
>mm_chr7_106549157_106550075
Length = 919
Score = 919 bits (475), Expect = 0.0
Identities = 505/515 (98%)
Strand = Plus / Plus
Query: 5 gaattccagcatgttacgcgtgagactgtccaaaaaacaaaacaaacaaataaataaaca 64
|||||||||| || | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagcttggaatgcgtgagactgtccaaaaaacaaaacaaacaaataaataaaca 264
Query: 65 aaccaaaacaaagcaaacatctgcctttcattttataaatcggaggtttaagatgggctc 124
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 265 aaccaaaacaaagcaaacatctgcctttcattttataaattggaggttcaagatgggctc 324
Query: 125 aggccagcagctcctggcttggtgcatgtggcttgaacagcaagaagctggatcactggg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggccagcagctcctggcttggtgcatgtggcttgaacagcaagaagctggatcactggg 384
Query: 185 actggggcttctctttgccctcacacagtttcagggtctcctttgtccaaatgcctggtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 385 actggggcttctctttgccctcacacagtttcagggtctcctttgtccaaacgcctggtt 444
Query: 245 gagagctgagcatggtggtgcatacctttaatttcagcactcgggaggcagaggcaggca 304
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagagctgagcgtggtggtgcatacctttaatttcagcactcgggaggcagaggcaggca 504
Query: 305 gatcattgtgagtttgaggccagcctggtctaactaatgagttctgggccagccagggcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gatcattgtgagtttgaggccagcctggtctaactaatgagttctgggccagccagggcc 564
Query: 365 atacaattagactctgtctccaaacaaacaaaaatacctggttgagccctcccatagcag 424
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 565 atacaattagactctgtctacaatcaaacaaaaatacctggttgagccctcccatagcag 624
Query: 425 gctggttccaatgtagtcgaagtaactaccaaggggttcagggttacggcaggagcatgc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gctggttccaatgtagtcgaagtaactaccaaggggttcagggttacggcaggagcatgc 684
Query: 485 tcaggagtgagggaaaaaacatctgtgctccctta 519
|||||||||||||||||||||||||||||||||||
Sbjct: 685 tcaggagtgagggaaaaaacatctgtgctccctta 719
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_m14.g1 MSMg01no358_m14.g1 CHROMAT_FILE:
MSMg01no358_m14.g1 PHD_FILE: MSMg01no358_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:08 2005
(476 letters)
>mm_chr7_106732613_106733488
Length = 876
Score = 688 bits (356), Expect = 0.0
Identities = 402/428 (93%), Gaps = 18/428 (4%)
Strand = Plus / Minus
Query: 56 aatgtgtgtactggagatctagttctctcctcctctcagctgtccacagcctctgctgta 115
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 876 aatgtgtgtactggagatctagttctcttctcctctcagctgtccacagcctctgctgta 817
Query: 116 ctcgggttatgttcaacactggcccacagagaactctcagaaacctctgcctgaagccga 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 816 ctcgggttatgttcaacactggcccacagagaactctcagaaacctctgcctgaaaccga 757
Query: 176 acacaggtgaa-------cccagggcctcggaaaagtcagttctggagaagatgcaaata 228
||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 756 acacaggtgaacccagggcccagggcctcggaaaagtcagttctggagaagatgtaaata 697
Query: 229 gtggaacatcagaaggcctattagctgtccccaagcaaagctggagaggtcaagtaggtg 288
|||| ||||||||||||||| ||||||| |||||||||||||| ||||||
Sbjct: 696 gtgggacatcagaaggccta-----------caagcaaggctggagaggtcaactaggtg 648
Query: 289 gttctgttccaggtcctaaaggaaggggcctggatcttcagcttgtagccctgtcaacac 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gttctgttccaggtcctaaaggaaggggcctggatcttcagcttgtagccctgtcaacac 588
Query: 349 ccgtaggctcagggcccgaggcttctgcttatatttacaaagctcttttctctatgagct 408
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 587 ccgtaggctcagggcccgaggcttctgcttatattcacaaagctcttttctctatgagct 528
Query: 409 gaaatctgctgctatgctttgccttctggactctggcacagcaagggtccctcggcccaa 468
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 527 gaaatctgctgctatgctttgccttctggactctggcacagcaagggtccctcagcccaa 468
Query: 469 ggacggtg 476
||||||||
Sbjct: 467 ggacggtg 460
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
