Query= MSMg01no359_l17.b1 MSMg01no359_l17.b1 CHROMAT_FILE:
MSMg01no359_l17.b1 PHD_FILE: MSMg01no359_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:17 2005
(413 letters)
>mm_chr7_141916332_141917148
Length = 817
Score = 748 bits (387), Expect = 0.0
Identities = 398/403 (98%), Gaps = 4/403 (0%)
Strand = Plus / Plus
Query: 15 gaattcagtgtgttgctctgatgtgtgtgatgagtgttttaagtagtctttttttgtttt 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gaattcagtgtgttgctctgatgtgtgtgatgagtgttttaagtagtctttttttgtttt 274
Query: 75 gtttttaagttttcactttgatttgttaatagtgt--ctcaggggaaactgcagctgcca 132
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 275 gtttttaagttttcactttgatttgttaatagtgtgtctcaggggaaactgcagctgcca 334
Query: 133 tgctgaccttttcctttgtctgtgacccccattttcttcggggtgaaaagatcacaagtt 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgctgaccttttcctttgtctgtgacccccattttcttcggggtgaaaagatcacaagtt 394
Query: 193 acatgggctatggttcaaggaagcaattgtggcttttctgatgctcttggttagtgcctt 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 acatgggctatggttcaaggaagcaattgtggcttttctgatgctcttggttagtgcctt 454
Query: 253 gcacagcctgcgagccactgtgggtgttctgcggtggttgttactgagtgtaggggcatc 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gcacagcctgcgagccactgtgggtgttctgcggtggttgttactgagtgtaggggcatc 514
Query: 313 ggcgggcgggcagcttgcttcgttacttctct--ttttaggcatcgctcccctcagtttc 370
||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 515 ggcgggcgggcagcttgcttccttacttctctctttttaggcatcgctcccctcagtttc 574
Query: 371 cttaaggttggtgtttctgtgtctgctggcttccttttctgcc 413
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 cttaaggttggtgtttctgtgtctgctggcttccttttctgcc 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 817
Length adjustment: 9
Effective length of query: 404
Effective length of database: 808
Effective search space: 326432
Effective search space used: 326432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_l17.g1 MSMg01no359_l17.g1 CHROMAT_FILE:
MSMg01no359_l17.g1 PHD_FILE: MSMg01no359_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:17 2005
(415 letters)
>mm_chr7_142078613_142079427
Length = 815
Score = 772 bits (399), Expect = 0.0
Identities = 411/415 (99%)
Strand = Plus / Minus
Query: 1 aataattgcaggtgcccaggattagacggtagtctagcaagtgctagccacatgctccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aataattgcaggtgcccaggattagacggtagtctagcaagtgctagccacatgctccgt 556
Query: 61 tgtaacaaatgaaaagctacctgggacagccgaaatggccttgacatggaaggcgtgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tgtaacaaatgaaaagctacctgggacagccgaaatggccttgacatggaaggcgtgttt 496
Query: 121 cagtattagcttagctaactgtcacatctcacagactcctgaaagactcttttgcctaag 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 495 cagtattagcttagctaactgtcacatctcacagactcctgaaaggctcttttgcctaag 436
Query: 181 catccagactgagaattctctaatgcttttttttcttatcagtaccagactcaatggcaa 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 435 catccagactgagaattctctaatgcttttttttctaatcagtaccagactcaatggcaa 376
Query: 241 aatgtgcagtcaacacccaacagtaagaacaaagtaataaggaaactattcactaatagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aatgtgcagtcaacacccaacagtaagaacaaagtaataaggaaactattcactaatagt 316
Query: 301 gaaatggtcttttacagacctgtaggtctgagaatgtgttctttctagaatttggtaaaa 360
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gaaatggtctttcacagacttgtaggtctgagaatgtgttctttctagaatttggtaaaa 256
Query: 361 cagcaattatcattccttgaactggagtcaatggaagctcactgatgatgtggga 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cagcaattatcattccttgaactggagtcaatggaagctcactgatgatgtggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
