Query= MSMg01no360_e15.b1 MSMg01no360_e15.b1 CHROMAT_FILE:
MSMg01no360_e15.b1 PHD_FILE: MSMg01no360_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:00 2005
(544 letters)
>mm_chr7_89847140_89848083
Length = 944
Score = 967 bits (500), Expect = 0.0
Identities = 533/544 (97%)
Strand = Plus / Plus
Query: 1 tattttgtttctatttctttggaaaatgccactaaacttctgatttagctggcgattgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattttgtttctatttctttggaaaatgccactaaacttctgatttagctggcgattgat 260
Query: 61 ctggctttgtgagtagccatagccaacttcattagaactgcaggagtacgggaacaccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctggctttgtgagtagccatagccaacttcattagaactgcaggagtacgggaacaccct 320
Query: 121 gtctctgctcctacgccctccttggggttactatggcttggacccctttgtgtcttaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctctgctcctacgccctccttggggttactatggcttggacccctttgtgtcttaaat 380
Query: 181 ggccctgtaacctagagttgctcagcacatgtccagggaaagaaagccactctgtggtgt 240
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 381 ggccctgtaacctagagttgctcagcatatgtccagggaaagaaagccgctctgtggtgt 440
Query: 241 ggacagcttgttcgacctttttgaggctgccttgcctaaggctcggtgtgttgtcttctc 300
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggacagcatgggcgacctttttgaggctgccttgcctaaggctcggtgtgttgtcttctc 500
Query: 301 cagtacagctggtaggagcatggcaggcagtggcttgtggttttcttctgggtttctaga 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 cagtacagctggtaggagcatggcaggcagtggtttgtggttttcttctgggtttctaga 560
Query: 361 tactgtccaagtctgtggttacatgtccttagaagggctgaaaccatctctttttcatcc 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 tactgtccaagtctgtggttacatgtccttagaaggtctgaaaccatctctttttcatcc 620
Query: 421 atctctcaagggagccatggttctgccctctgctgtgggaagaactactctgaggtagaa 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 621 atctctcaagggagccatggttctgccctctgctatgggaagaactactctgaggtagaa 680
Query: 481 catttcatttcttcataaggaaaatagacatatatctccctcttctaaagcttgtggagg 540
|||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 681 catttcatgtcttcatgaggaaaatagacatatacctccctcttctaaagcttgtggagg 740
Query: 541 tgga 544
||||
Sbjct: 741 tgga 744
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no360_e15.g1 MSMg01no360_e15.g1 CHROMAT_FILE:
MSMg01no360_e15.g1 PHD_FILE: MSMg01no360_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:00 2005
(469 letters)
>mm_chr7_89986442_89987308
Length = 867
Score = 832 bits (430), Expect = 0.0
Identities = 458/468 (97%), Gaps = 2/468 (0%)
Strand = Plus / Minus
Query: 2 ctgagttgtaagagaagtggcaccacgagacagtggctcttgtctggaccgcaatagacc 61
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 667 ctgagttgtaagagaagtggcaccacgagacagtggctcttgtctggacagcaatagacc 608
Query: 62 attctgctctttgtgcttttgctgactttgtggcccacaaatgcactctctgttcaacca 121
||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 607 attctgctctttgtgcttttgctgactctgtggcccacaaatgca--ctctgttcaacca 550
Query: 122 aagttccctaggcagcacagggtgccatgtaagtgcttatggttgccaaaattacagagt 181
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aagttccctaggcagcacagggtgccatgtaagtgcttatggttgccaaaattacagagc 490
Query: 182 cacactgcctagagcttaccagccttgtagcgcaaaggagggttcttgtacagtgtgaaa 241
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 489 cacactgcctagagcttaccagccttgtagagcaaaggagggttcttgtacagtgtgaaa 430
Query: 242 gtgcattaatgagcttgtgcgaagggatattctcgaaagtgggtcaagtactatgtccca 301
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gtgcagtaatgagcttgtgtgaagggatattctcgaaagtgggtcaagtactatgtccca 370
Query: 302 ggagcatatgtaacaactttgaaaaagaggtgaaatttagtgatgtgttctgaaattctg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ggagcatatgtaacaactttgaaaaagaggtgaaatttagtgatgtgttctgaaattctg 310
Query: 362 gacttttatctatttttcagaaggagagactggccttgggcctcaagcttgagtgagccc 421
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 309 gacttttatctatttttcagaaggagagactggccttgggccttaagcttgagtgagccc 250
Query: 422 caattttcttcactgacacggcttttcatcaggccctggcaacaacct 469
|||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 249 caattttcttcactgacaaggcttttcatcaggccctggcaacaacct 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 867
Length adjustment: 10
Effective length of query: 459
Effective length of database: 857
Effective search space: 393363
Effective search space used: 393363
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
