Query= MSMg01no360_i11.b1 MSMg01no360_i11.b1 CHROMAT_FILE:
MSMg01no360_i11.b1 PHD_FILE: MSMg01no360_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:18 2005
(551 letters)
>mm_chr7_151197707_151198657
Length = 951
Score = 1019 bits (527), Expect = 0.0
Identities = 545/551 (98%)
Strand = Plus / Plus
Query: 1 tgacttctctgtctaggatgaatgatgtttctttacgtctccctaggaaaagtcccatga 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 tgacttctctgtctaggatgaatgatgtttctttacatctccctaggaaaagtcccatga 260
Query: 61 cacatggggcaaagcctggtctagtggctctctggagagacataccctggtcatgcctgc 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 cacatggggcaaagcctggtctagtggctctctggagagacctaccctggtcatgcctgc 320
Query: 121 attctagactcctgcctctgaaatgtgagctgatacatgttggctgtgtggctgcaccct 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attctacactcctgcctctgaaatgtgagctgatacatgttggctgtgtggctgcaccct 380
Query: 181 tgagaaatgtgctcagagatgccaggcagggagctgcagaataggaggtggcactgtctg 240
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 381 tgagaaatgtgctcagagatgccaggcagggagctgcagaatagaaagtggcactgtctg 440
Query: 241 ctgtctctgctgtgtggattagggggatggagacccttcccaggccttagtttcctccct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgtctctgctgtgtggattagggggatggagacccttcccaggccttagtttcctccct 500
Query: 301 ggattggggttggatttaaggtctcctctgtgtgggttgaagaagcatcaatgccaagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggattggggttggatttaaggtctcctctgtgtgggttgaagaagcatcaatgccaagta 560
Query: 361 cagttccagcatggaccctggaatggctctgctggctgcagatgtgtttaaagcatggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagttccagcatggaccctggaatggctctgctggctgcagatgtgtttaaagcatggat 620
Query: 421 gcctcgagccagtaaccttgtccccactgacttggctttcctagagaccagggtgagtga 480
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcctcgagccagtaaccttgttcccactgacttggctttcctagagaccagggtgagtga 680
Query: 481 cttggaagcaggatagagatgcatagaggatggctgtgtgaagatactgggaagaagaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttggaagcaggatagagatgcatagaggatggctgtgtgaagatactgggaagaagaca 740
Query: 541 ccatctgcagg 551
|||||||||||
Sbjct: 741 ccatctgcagg 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no360_i11.g1 MSMg01no360_i11.g1 CHROMAT_FILE:
MSMg01no360_i11.g1 PHD_FILE: MSMg01no360_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:18 2005
(232 letters)
>mm_chr7_151390939_151391571
Length = 633
Score = 381 bits (197), Expect = e-110
Identities = 215/221 (97%), Gaps = 1/221 (0%)
Strand = Plus / Minus
Query: 1 tgacatgaactgcccggagccagcaggagagttggtggctgccaccggctgatgagagag 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 362 tgacatgaactgcccggagccagcaggagagttggtggctgccaaaggctgatgagagag 303
Query: 61 ggaagcaagagactgttttgggtgccagctttatacttaaggcactagagcatattggaa 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 302 ggaagcaagagactgttttgggtgccagctttatagttaaggcactagagcatattggaa 243
Query: 121 ttcaatacactgagg-ttttcagaactatgtgaataaaaagaagaaaagaagaagatagg 179
||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 242 ttcaatacactgaggtttttcagaactatgtgaataaaaagaagaaaagaagaggagagg 183
Query: 180 agaggagaggagaggagaggagaggagaggagaggagagga 220
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agaggagaggagaggagaggagaggagaggagaggagagga 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 633
Length adjustment: 9
Effective length of query: 223
Effective length of database: 624
Effective search space: 139152
Effective search space used: 139152
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
