Query= MSMg01no360_j17.b1 MSMg01no360_j17.b1 CHROMAT_FILE:
MSMg01no360_j17.b1 PHD_FILE: MSMg01no360_j17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:24 2005
(476 letters)
>mm_chr7_31550381_31551256
Length = 876
Score = 743 bits (384), Expect = 0.0
Identities = 387/388 (99%)
Strand = Plus / Minus
Query: 89 aacatggacttagtacaccccagacaagcactctccaccactgggcaccagcaccagcct 148
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 876 aacatggacttagtacaccccagacaagcactctccaccgctgggcaccagcaccagcct 817
Query: 149 cctcctttgggtggcacaattctcagacccctaaggaaactcgtgtggcctccaagtttg 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 cctcctttgggtggcacaattctcagacccctaaggaaactcgtgtggcctccaagtttg 757
Query: 209 aactctgtctgtctctgcctctgcctgtctctgtctctctgtctctctctgtgtctctcc 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 aactctgtctgtctctgcctctgcctgtctctgtctctctgtctctctctgtgtctctcc 697
Query: 269 ttgtctctgtctctctctctctcagctcctctctaaggtgcctctcctggggctctcact 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 ttgtctctgtctctctctctctcagctcctctctaaggtgcctctcctggggctctcact 637
Query: 329 catcacatgggaacctcacgcgtgcacagttagttactagcattgtctacaccgcagcta 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 catcacatgggaacctcacgcgtgcacagttagttactagcattgtctacaccgcagcta 577
Query: 389 tccttaagtctccatgataacaaccttcccctattctcctggaagcaccccaaacgagtg 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tccttaagtctccatgataacaaccttcccctattctcctggaagcaccccaaacgagtg 517
Query: 449 ggggttttcttatttgctttgtttaaga 476
||||||||||||||||||||||||||||
Sbjct: 516 ggggttttcttatttgctttgtttaaga 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no360_j17.g1 MSMg01no360_j17.g1 CHROMAT_FILE:
MSMg01no360_j17.g1 PHD_FILE: MSMg01no360_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:24 2005
(445 letters)
>mm_chr7_31340729_31341573
Length = 845
Score = 750 bits (388), Expect = 0.0
Identities = 434/460 (94%), Gaps = 19/460 (4%)
Strand = Plus / Plus
Query: 1 tggatctacaggcatctccaagtggtccaggagctgtgggtggaggcagcttgtacacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tggatctacaggcatctccaagtggtccaggagctgtgggtggaggcagcttgtacacat 249
Query: 61 cacggtttttgctgttgatgacctctgaaccctggggagacaaaaccccagacgagaccc 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 250 cacggtttttgctgttgatgacctctgaaccctggggagacaaagccccagacgagaccc 309
Query: 121 aagagtcagagcagagggttgaaagtacatgtcgctgggcgtggtggcg----------- 169
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 310 aagagtcagagcagagggttgaaagtacatgtcgctgggtgtggtggcgcatgcctttaa 369
Query: 170 tcccagcactcgagaggcagaggcaggcggatttctgagttcgaggccagcctggtctac 229
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 370 tcccagcactcgagaggcagaggcaggtggatttctgagttcgaggccagcctggtctac 429
Query: 230 aaagtgagttccaagattttctg----ggctatacagagaaaccctgtcttgaaaaatcc 285
||||||||||||| || | | |||||||||||||||||||||||||||||||||
Sbjct: 430 aaagtgagttccagga----cagccagggctatacagagaaaccctgtcttgaaaaatcc 485
Query: 286 aaaaaaagaaaaaaagaaaaagaaagtacgtgtcatcgctcctacctttcccagcaagac 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aaaaaaagaaaaaaagaaaaagaaagtacgtgtcatcgctcctacctttcccagcaagac 545
Query: 346 agacatgaggggtctacccagaaacctgtacttggagaagtcacagtagaagggacatgc 405
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 agacatgaggggtctatccagaaacctgtacttggagaagtcacagtagaagggacatgc 605
Query: 406 ctttatcagctagaagatagtcatcctgttctagggaccg 445
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 606 ctttatcagctagaagatagtcgtcctgttctagggaccg 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
