Query= MSMg01no361_h16.b1 MSMg01no361_h16.b1 CHROMAT_FILE:
MSMg01no361_h16.b1 PHD_FILE: MSMg01no361_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:32 2005
(598 letters)
>mm_chr7_71521342_71522339
Length = 998
Score = 859 bits (444), Expect = 0.0
Identities = 467/476 (98%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 5 gaattcttgtagtgccttttcatatttatgcatttattcattgttgtaatcataatgtac 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gaattcttgtagtggcttttcatatttatgcatttattcattgttgtaatcataatgtac 417
Query: 65 tgctatagactttgggttttctcacataaccacattttataacatctctgttttgtttta 124
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 416 tgctatagactttgggttttcttacataaccacattttataacatctctgttttgtttta 357
Query: 125 actgcaggatgaacgaaaagataagcccttaaagtcatctcaggcattcttttctaaatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 actgcaggatgaacgaaaagataagcccttaaagtcatctcaggcattcttttctaaatt 297
Query: 185 acaagatcaagtaaaaatgcaaattaatgatgcaaaacagcctgagaagataaagaagaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 acaagatcaagtaaaaatgcaaattaatgatgcaaaacagcctgagaagataaagaagaa 237
Query: 245 aaaacaggacatttctgttcataaattaaagctataatatatttaaatttaatgtataaa 304
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 236 aaaacaggacatttctgttcataaattaaagctgtaatatatttaaatataatgtataaa 177
Query: 305 tctgtaagtttctgtcatcattatgttttataataaaattcctgagccctctcttagttt 364
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tctgtaagtttctgtcatcgttatgttttataataaaattcctgagccctctcttagttt 117
Query: 365 gtttcc---tgttttaataaagaccatcaccaaagtctcttgtacaggaacgggcttatt 421
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 gtttcctgttgttttaataaagaccatcaccaaagtctcttgtacaggaacgggcttatt 57
Query: 422 tcatcttacagtttacagtccatcactgagggactcagaggcaggaactgaatcaa 477
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 56 tcatcttacagtttacagtccatcactgagggactcggaggcaggaactgaatcaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_h16.g1 MSMg01no361_h16.g1 CHROMAT_FILE:
MSMg01no361_h16.g1 PHD_FILE: MSMg01no361_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:32 2005
(470 letters)
>mm_chr7_71352020_71352889
Length = 870
Score = 799 bits (413), Expect = 0.0
Identities = 453/471 (96%), Gaps = 10/471 (2%)
Strand = Plus / Plus
Query: 1 tcccatcacttcctgctggatctatcaccaaaaatttgtctattcctactgtgcccttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tcccatcacttcctgctggatctatcaccaaaaatttgtctattcctactgtgcccttga 268
Query: 61 agaattctattatttatttatttatttattttaaatcagagtagactctggaaataagcc 120
|||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 269 agaattatattatttatttattt--------taaatcagagtagactctggaaataagcc 320
Query: 121 attggcaatgggctaatagtactccacgcttttacccctaaggtaatatcgtggggccag 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 attggcaatgggctaatagtactccacgcttttacccctaaggtaatatcctggggccag 380
Query: 181 aagtgttttagtcttggatttataaattttggacatatttgcataccctttaccaatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtgttttagtcttggatttataaattttggacatatttgcataccctttaccaatgat 440
Query: 241 catctccaatccaaatatttggtcttggaagatgttttggggacgggtgatgctcaacct 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 catctccaatccaaatatttggtcttggaagatgtcttggggacgggtgatgctcaacct 500
Query: 301 tttctcccgtattcgaggctctggaggcagcaacaagagcagattaccacacgtgtgcct 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 501 tttctcccgtattcgaggctctggaggcagcaacaagagcagactaccacacgagtgcct 560
Query: 361 cttcgacttcccaaacactacgtaaaagccaaatctattcttatatttcaggttca-ttg 419
||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 561 ctttgacttcccaaacactacgtaaaagccaaatctattcttatatttcaggt-ctgttg 619
Query: 420 ctcttcttgagataagtgaggtcctgatccttttacaactggtcatctgag 470
||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 620 ctcttcttgagataagtgaggtcctgatccttttacaactggtcacctgag 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
