Query= MSMg01no362_l20.b1 MSMg01no362_l20.b1 CHROMAT_FILE:
MSMg01no362_l20.b1 PHD_FILE: MSMg01no362_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:13 2005
(380 letters)
>mm_chr7_77607223_77607999
Length = 777
Score = 530 bits (274), Expect = e-155
Identities = 342/380 (90%), Gaps = 27/380 (7%)
Strand = Plus / Plus
Query: 5 gaattctgcttataacgactttgttccgctcttttaaagcagcaaaattttatatggtga 64
||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgcttataaagactttattcctctcttttaaagcagcaaaattttatatggtga 264
Query: 65 ttttggtgaaacggtctgagggtattaaaaaatcaacccccccccaaattgtgtattaaa 124
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 265 ttttggtgaaacggtctgagggtattaaaaaatcaaccccccc---aatcgtgtattaag 321
Query: 125 tagcttaatgggacctatactcagctctcttttagacatgattaatcacagaggaactgt 184
||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 322 tagctcaatgggacctatactcagctctcttttagacatgtttaatcacagaggaaccat 381
Query: 185 gtctatgctgtatatgtgtgtgtgt----atgatgtatatgtacatatatatatacgtgt 240
||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 382 gtctatgctgtatatgtgtgtgtgtgtgtatgatgtatatgta--tatatatata----- 434
Query: 241 gcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatcatttatctctccaatcaatctacca 300
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 -------------tgtgtgtgtgtgtgtgtgtatcatttatctctccaatcaatctacca 481
Query: 301 tctatctacctgttctagattcactgtatttcaacatgtggagcacattatatgctcttt 360
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 482 tctatctacctgttctagattcactgtatttcaacatgtggagtagattatatgctcttt 541
Query: 361 tatagatagagctcaggctc 380
||||||||||||||||||||
Sbjct: 542 tatagatagagctcaggctc 561
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 777
Length adjustment: 9
Effective length of query: 371
Effective length of database: 768
Effective search space: 284928
Effective search space used: 284928
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_l20.g1 MSMg01no362_l20.g1 CHROMAT_FILE:
MSMg01no362_l20.g1 PHD_FILE: MSMg01no362_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:13 2005
(452 letters)
>mm_chr7_77791797_77792644
Length = 848
Score = 727 bits (376), Expect = 0.0
Identities = 430/462 (93%), Gaps = 24/462 (5%)
Strand = Plus / Minus
Query: 11 gaaatacagaagatcctcagagacatctttggagcgagcaactgcctgagctgtggagca 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 848 gaaatacagaagatcctcagagacatctttggagcgagcaactgcctgagctgtggaaca 789
Query: 71 agagaaactcaaaaagagacccttagttgttgtcttcttttctctgaaatcagccacagt 130
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 788 agagaaactcaaaaagagacccttagctgttgtcttcttttctctgaaatcagccacagt 729
Query: 131 gtccagttcccttgcctcccccctccccac------tttgttgttgttg----------- 173
|||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 728 gtccagttcccttgcctcccccctccccacattttttttgttgttgttgggttttttttt 669
Query: 174 ---ttgttgttgttgttgttcaagtggtttggctggttctatgtctggtgagaagagact 230
|| || || || |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 668 tttttttttttttttttgttcaagtggtttggctggttctatgtctggtgagaagggact 609
Query: 231 attgagagtcactcagctgccaattgaccatagtctagaatgtcccaagcttatgtcagt 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 attgagagtcactcagctgccaattgaccatagtctagaatgtcccaagcttatgtcagt 549
Query: 291 tagcaaggagagaaaccattccagagaacaaagaacaatacacacaaggatgactacatg 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tagcaaggagagaaaccattccagagaacaaagaacaatacacacaaggatgactacatg 489
Query: 351 tctgaagtcagcaaggcaaacaaaggaaacaaactgtaccagatgttctacaggttgtgc 410
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 488 tctgaagtcagcaaggcaaacaaaggaaacaaactgtaccagatgctctacaggttgtgc 429
Query: 411 tggtgacagagaaagacaagaaggaacccagtgaggagcatg 452
|||||||| ||||||||||||||||||||||||||||||
Sbjct: 428 tggtgaca----aagacaagaaggaacccagtgaggagcatg 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 848
Length adjustment: 10
Effective length of query: 442
Effective length of database: 838
Effective search space: 370396
Effective search space used: 370396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
