Query= MSMg01no363_b04.b1 MSMg01no363_b04.b1 CHROMAT_FILE:
MSMg01no363_b04.b1 PHD_FILE: MSMg01no363_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:40 2005
(606 letters)
>mm_chr7_62575565_62576572
Length = 1008
Score = 1133 bits (586), Expect = 0.0
Identities = 599/604 (99%), Gaps = 2/604 (0%)
Strand = Plus / Plus
Query: 5 gaattcctttaataatcacaaattctgtacttatcatcaaatattttagacacaagttaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctttaataatcacaaattctgtacttatcatcaaatattttagacacaagttaa 264
Query: 65 attttactacacaaacata--atgtggcaactacaagcatacaaattgtattttttctag 122
|||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attttactacacaaacttattatgtggcaactacaagcatacaaattgtattttttctag 324
Query: 123 ataatttaatttatgagcacatatatctaatatgatattgaaatcctgtttctctcatat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ataatttaatttatgagcacatatatctaatatgatattgaaatcctgtttctctcatat 384
Query: 183 gtcaagaaagtagacatcaaaagaccatttgaaataaggtccatttgattcaacatctca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtcaagaaagtagacatcaaaagaccatttgaaataaggtccatttgattcaacatctca 444
Query: 243 gtgaaccaggaagattgccatattcttactcaagacattaatcactttctttacatcagt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtgaaccaggaagattgccatattcttactcaagacattaatcactttctttacatcagt 504
Query: 303 aatatctgcttggactaatatcatgttatctctaaaacagaaccctctgaaaatgtcata 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aatatctgcttggactaatatcatgttatctctaaaacagaaccctctgaaaatgtcata 564
Query: 363 ttttagcatattcaaatgtaaaacacacatcagatttatatcattcatgttctgtttctg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttttagcatattcaaatgtaaaacacacatcagatttatatcattcatgttctgtttctg 624
Query: 423 gtattaagaaactatttaagtagatcagtaaccatgatgagtcctctagatttacacaga 482
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 625 gtattaagaaactatttaagtagatcagtaaccatgatgagtcctctggatttacacaga 684
Query: 483 agatatatactttcctaaatatagaatttcaaggatgtgaactttccagaatataaactc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agatatatactttcctaaatatagaatttcaaggatgtgaactttccagaatataaactc 744
Query: 543 tctgggacatagacctggaacgcagatgttctagagtaataatcttagaaatttaccttt 602
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tctgggacatagacctggaatgcagatgttctagagtaataatcttagaaatttaccttt 804
Query: 603 taga 606
||||
Sbjct: 805 taga 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1008
Length adjustment: 10
Effective length of query: 596
Effective length of database: 998
Effective search space: 594808
Effective search space used: 594808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_b04.g1 MSMg01no363_b04.g1 CHROMAT_FILE:
MSMg01no363_b04.g1 PHD_FILE: MSMg01no363_b04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:40 2005
(268 letters)
>mm_chr7_62609533_62610198
Length = 666
Score = 464 bits (240), Expect = e-135
Identities = 259/266 (97%), Gaps = 2/266 (0%)
Strand = Plus / Minus
Query: 1 ataactcatgatatttatggaaggataatcattgttataaaattttatcttgttgcataa 60
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 424 ataactcatgatatttatggaaggataatca--gttataaaattttatcttgttgcataa 367
Query: 61 catctgctgctatatttatatcaaatttttgtctccaatattctacatttccatataaag 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 catctgctgctacatttatatcaaatttttgtctccaatattctacatttccatataaag 307
Query: 121 ataaataaaatcagtatttctagaattctattagtcactgggagtcaaatatttgatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ataaataaaatcagtatttctagaattctattagtcactgggagtcaaatatttgatgtg 247
Query: 181 gctcttgtttttaccaataacctagttttgagagatttatttttaagtgtatgtgcgtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gctcttgtttttaccaataacctagttttgagagatttatttttaagtgtatgtgcgtga 187
Query: 241 gtgagtgtgtgtgtgtgtgtgtgtgt 266
||||||| ||| ||| ||| ||||||
Sbjct: 186 gtgagtgagtgagtgagtgagtgtgt 161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 666
Length adjustment: 9
Effective length of query: 259
Effective length of database: 657
Effective search space: 170163
Effective search space used: 170163
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
