XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TGATTATAAGCATTCATTCTCAACAGAAAAGGGCAAGGATGACGCTGCTT
AGAAACCTTCCTGAGATCACTGGGCATCCATTTCCTCCCCCTTGTAATGT
TGTAAGCAGGAAACAGCGAACCTGGGACTCTTCCATAGCATAGCTGCCCA
TTCCTTACCCAGGATTTCTGGAGCTGCTGTGTTCTTACAGCCATGACCCT
GTAAGTTAATTCCCACTTTTCTGAAAGCCAGATGAAGTGCTTTAACAGAT
GCATCAGTGATCTTCCTATATGGGGTTAATGCCATTTCTTTCCCTTTCCT
GACACACAGTGTCATATGAACAAACTTGTAAGTAGCTTGATCACATCTTT
AGCAGAGGATGCAAAATATAGGATATTTTTAGAGAAACATCATTTATTTT
TTTTTAAAATGTCCACATGTGAAAGAGTTGTCATGTTCTTTTGTGAGAAC
CAACACACCCATGCTTTCTTAATTCTTATGAGGAAACAATCCTAGGAGAG
AAAGTGAGCAATGTGAAGAAACTATGAACGTGCTCTCTCTCACATTCTGA
TGGGAATTAATACTAGTCATTTAAAATCTGTCTTTCTTCATTCTTTGTCA
TTCAAAATAAGAACTACATGGACAAGAGGAAGGCAAATGGCAGTTTTGTT
CATACATCTGGAAGTAATGTATTATAATGCCCTCCTG

NNNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATGAATATGAAGGTGTA
ACATATCCTAACTTTTAAGACATGTTGCTAAGAGGAAAACACTTAGTTCT
GATTGCCTCCAAAAAGAAACTGGAGAGAGCATACATTAGCAATAGCACAC
CTAAAAGCTCTAGAACAAAAAGAAGCAAATATACCCAAGAGGAGTAGACC
ACAGGAAATAATCAGACTCAGTGCTGAAATCAACAAGTAGAAACAAAAAG
AACTATACAAAGAATCAACCAAATCTGGAGCTGGTTCTTTGAGAAAATCA
ACAAGATAGAAAAACCCTTAGCCAGACTAACCAGAGGACACAGAGATAGT
ATCCAAATTAACAAAATCAGAAATGGAAAGGGAGATATAAGAAAACATAC
TGAGGAAATTCAAAAAATCATTATATCCTACTACAAAAGCCTATACTCAA
CACAACTGGGAAATATGGATGAAAAGGGCAATTTTCTAAACAGATAACAA
ATACCAAAGTTAAATCTGGTTCAGATAAACCATCTACACAGTCCCATAAC
AACTAAAGAAATAGAAGCAGTCATTGGTCTTCCAACCAAAAAAATCCAGA
ACCATATGGGTTTAGTGCAGAATTCTATCATACCTTCAAAGAAAATCTAA
TACCAATACTCTTTCAAATATTCCCCCAAATATAAACAGAAGGGACACTA
TCC

Query= MSMg01no363_c07.b1 MSMg01no363_c07.b1 CHROMAT_FILE:
MSMg01no363_c07.b1 PHD_FILE: MSMg01no363_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:45 2005
         (644 letters)



>mm_chr7_61481719_61482755
          Length = 1037

 Score = 1027 bits (531), Expect = 0.0
 Identities = 611/643 (95%), Gaps = 11/643 (1%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctgattataagcattcattctcaacagaaaagggcaaggatgacgctgcttaga 63
           ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 837 ggaatcctgattataagcattcattctcaacagaaaagggcaaggatgactctgcttaga 778

                                                                       
Query: 64  aaccttcctgagatcactgggcatccatttcctcccccttgtaatgttgtaagcaggaaa 123
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 777 aaccttcctgagatcactgggcatccatttcctcccccttgtaatgttataagcaggaaa 718

                                                                       
Query: 124 cagcgaacctgggactcttccatagcatagctgcccattccttacccaggatttctggag 183
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 717 cagcgaacctgggactcttccatagcatagctgcccattccttacccagggtttctagag 658

                                                                       
Query: 184 ctgctgtgttcttacagccatgaccctgtaagttaattcccacttttctgaaagccagat 243
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| 
Sbjct: 657 ctgctgtgttcttacagccatgaccctgtaagttaattcccacctttctgaaagccagag 598

                                                                       
Query: 244 gaagtgctttaacagatgcatcagtgatcttcctatatggggttaatgccatttctttcc 303
           | |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||
Sbjct: 597 ggagtgctttaacagatgcatcagtgatcttcttatatgtggtgaatgccatttctttcc 538

                                                                       
Query: 304 ctttcctgacacacagtgtcatatgaacaaacttgtaagtagcttgatcacatctttagc 363
           ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 537 ctttcctgacacacactgtcatatgaacaaactggtaagtagcttgatcacatctttagc 478

                                                                       
Query: 364 agaggatgcaaaatataggatatttttagagaaacatcatttattttttttt--aaaatg 421
           ||||||||||| ||||| |||||||||||||||||||||||||     ||||  ||||||
Sbjct: 477 agaggatgcaagatatatgatatttttagagaaacatcattta-----ttttaaaaaatg 423

                                                                       
Query: 422 tccacatgtgaaagagttgtcatgttcttttgtgagaaccaacacacccatgctttctta 481
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
Sbjct: 422 tccacatgtgaaagagttatcatgttcttttgtgagaaccaacacacccatgcttt---- 367

                                                                       
Query: 482 attcttatgaggaaacaatcctaggagagaaagtgagcaatgtgaagaaactatgaacgt 541
           |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 366 attcttctgaggaaacaattctaggagagaaagtgagcaatgtgaagaaactatgaacat 307

                                                                       
Query: 542 gctctctctcacattctgatgggaattaatactagtcatttaaaatctgtctttcttcat 601
           ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 306 gctctctcttacattctgatgggcattaatactagtcatttaaaatctgtctttcttcat 247

                                                      
Query: 602 tctttgtcattcaaaataagaactacatggacaagaggaaggc 644
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tctttgtcattcaaaataagaactacatggacaagaggaaggc 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1037
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1027
Effective search space:   651118
Effective search space used:   651118
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)