Query= MSMg01no363_n02.b1 MSMg01no363_n02.b1 CHROMAT_FILE:
MSMg01no363_n02.b1 PHD_FILE: MSMg01no363_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:39 2005
(564 letters)
>mm_chr7_106442295_106443261
Length = 967
Score = 1062 bits (549), Expect = 0.0
Identities = 562/567 (99%), Gaps = 3/567 (0%)
Strand = Plus / Minus
Query: 1 agcttaagcgtaggagacctcaaagcccacctccacagtgacacacttcctccaacaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 agcttaagcgtaggagacctcaaagcccacctccacagtgacacacttcctccaacaagg 734
Query: 61 ccacacccactccaacaaggccacacctcctaatagtgccattccctgtgggtcaagcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ccacacccactccaacaaggccacacctcctaatagtgccattccctgtgggtcaagcac 674
Query: 121 tcaaatgcatgagtctatgggggatgtacctatttaaacaccacagaaggtaacttgccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tcaaatgcatgagtctatgggggatgtacctatttaaacaccacagaaggtaacttgccc 614
Query: 181 taggtaggcagcttgccagtgaatgatggtggctgggctccttgcccttgtctgccctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 taggtaggcagcttgccagtgaatgatggtggctgggctccttgcccttgtctgccctgc 554
Query: 241 tcaaaagtcattcttccatcaagcacactcaagagcaaataaggatttctccctcttgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tcaaaagtcattcttccatcaagcacactcaagagcaaataaggatttctccctcttgac 494
Query: 301 tctcagtgtgtgcttctttttgttaagtacagctgtctacc--cacacacacagctagaa 358
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 493 tctcagtgtgtgcttctttttgttaagtacagctgtctacccacacacacacagctagaa 434
Query: 359 ttaaatgactgccttgcctctgattttaggcatgttgtttgatgttttggcattt-gggg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 433 ttaaatgactgccttgcctctgattttaggcatgttgtttgatgttttggcatttggggg 374
Query: 418 ggtcttagtgtgctggctagttttgggtcaacgtgacacaagctatcatcatctgagaag 477
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 373 ggtcttagtgtgctggctagttttgggtcaacttgacacaagctatcatcatctgagaag 314
Query: 478 aaagaaaatgcctcctgaagactaggctagaagcagacaagcctgtaaggcatttcctta 537
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 313 aaagaaaatgcctcctgaagactaggatagaagcagacaagcctgtaaggcatttcctta 254
Query: 538 attagtgacagatgggggagcttgaag 564
|||||||||||||||||||||||||||
Sbjct: 253 attagtgacagatgggggagcttgaag 227
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 967
Length adjustment: 10
Effective length of query: 554
Effective length of database: 957
Effective search space: 530178
Effective search space used: 530178
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_n02.g1 MSMg01no363_n02.g1 CHROMAT_FILE:
MSMg01no363_n02.g1 PHD_FILE: MSMg01no363_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:39 2005
(551 letters)
>mm_chr7_106257383_106258333
Length = 951
Score = 990 bits (512), Expect = 0.0
Identities = 541/552 (98%), Gaps = 4/552 (0%)
Strand = Plus / Plus
Query: 1 ttaatcacttcactcctataaaattctggaaaagaagaaaaacaacagtaagtgacagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaatcacttcactcctataaaattctggaaaagaagaaaaacaacagtaagtgacagga 260
Query: 61 aagacaggcagctcgttaactaagcactgtaaggctctggcgctctaggaaggcgtctaa 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagacaagcagctcgttaactaagcactgtaaggctctggcgctctaggaaggcgtctaa 320
Query: 121 actgatccagcgcctgccatctttaccaatgagaatagaaaaccaaaattaagtaaaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actgatccagcgcctgccatctttaccaatgagaatagaaaaccaaaattaagtaaaagt 380
Query: 181 ctcttaaggaggaaaaacatcagtgaagcacatcacaaattgttcagatttagtctcgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcttaaggaggaaaaacatcagtgaagcacatcacaaattgttcagatttagtctcgga 440
Query: 241 attgttacctgtctccttctgcagcacattctaatttaagcccttaaaaatacaaatgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 attgttacctgtctccttctgcagcacattctaatttaagcccttaaaaatccaaatgtt 500
Query: 301 ctccttttcccatttctactcactcctttcttttcatgtgaacacaatgagtgtgtgtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||| | | |
Sbjct: 501 ctccttttcccatttctactcactcctttcttttcatgtgaacacaatgaggggggg--- 557
Query: 361 g-gggggggtccttcagggggctgaggtgaggtcaggattctttccctattctctttaag 419
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 558 gcgggggggtccttcagggggctgagatgaggtcaggattctttccctattctctttaag 617
Query: 420 gcaggatatctcaatcaagccaaaacctcctctacacagctcgtgtggccagccagctgg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gcaggatatctcaatcaagccaaaacctcctctacacagctcgtgtggccagccagctgg 677
Query: 480 ctctggggatccatctctgccttctggggctagattacaggtggactgccacagtccccc 539
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 678 ctctggggatccatctctgccttctggggctagattacaggtgggctgccacagtccccc 737
Query: 540 tgcatccaggtg 551
||||||||||||
Sbjct: 738 tgcatccaggtg 749
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
