Query= MSMg01no364_g03.b1 MSMg01no364_g03.b1 CHROMAT_FILE:
MSMg01no364_g03.b1 PHD_FILE: MSMg01no364_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:28 2005
(388 letters)
>mm_chr7_121461155_121461942
Length = 788
Score = 690 bits (357), Expect = 0.0
Identities = 380/395 (96%), Gaps = 12/395 (3%)
Strand = Plus / Plus
Query: 6 gaattctatgagcatgtccctagttgaagagttgaaaaaagaaacggactcagaaggagt 65
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctatgagcatgggactagttgaagagttgaaaaaagaaacggactcagaaggagt 265
Query: 66 aagttactctgttcaaattcaatgcacagactttggaaaactgtcttttctgaaaactgt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aagttactctgttcaaattcaatgcacagactttggaaaactgtcttttctgaaaactgt 325
Query: 126 taaacatgatctactgaaagacgtgaggccagtgatgtgcctctgggtaaagatccatac 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 taaacatgatctactgaaagacgtgaggccagtgatgtgcctctgggtaaagatccatac 385
Query: 186 aaacaagcctggcatccgagtctacctgagggaagaggagaactgattcctgtaaggagt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aaacaagcctggcatccgagtctacctgagggaagaggagaactgattcctgtaaggagt 445
Query: 246 cctcagacagaactgtgccccacatgtgccccgccctggccccagtaaataagtacatgt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 cctcagacagaactgtgccccacatgtgccccgccctggccccagtaaataagtacatgt 505
Query: 306 acataaaagattttaaagacaatgtatcccccccattttcacctgtgtgtgtgtg----- 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 acataaaagattttaaagacaatgtatcccccccattttcacctgtgtgtgtgtgagtgt 565
Query: 361 -------tgtgtgagagagagagagagagagagag 388
||||||||||||||||||||||||||||
Sbjct: 566 gtgtgtgtgtgtgagagagagagagagagagagag 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_g03.g1 MSMg01no364_g03.g1 CHROMAT_FILE:
MSMg01no364_g03.g1 PHD_FILE: MSMg01no364_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:28 2005
(341 letters)
>mm_chr7_121620971_121621717
Length = 747
Score = 557 bits (288), Expect = e-163
Identities = 331/348 (95%), Gaps = 8/348 (2%)
Strand = Plus / Minus
Query: 1 tgctgatagtgtctttatatgtgtatcttttgatatctgtaatctctgcccaaaagcagt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tgctgatagtgtcttgatatgtgtatcttttgatatctgtaatctctgcccaaaagcagt 488
Query: 61 acaaaagagcagcacactcctctgtgtgtgtcttggtggggagggggg-----tcagtag 115
|||||||||||||||||||||||||||||||||||| |||| |||||| |||||||
Sbjct: 487 acaaaagagcagcacactcctctgtgtgtgtcttggggggggggggggggggatcagtag 428
Query: 116 ttccctataaggattcaagtgcaaaatgataaccttttacagtctgccctcttgaacaca 175
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 427 ttccctataaggattcaactgcaaaatgataaccttttacagtctgccctcttgagcaca 368
Query: 176 ggaattatcaatgccagatacaaaccagaaacagaaagactgctaggttttcatttgtag 235
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 367 ggaattatcaatgccagatacaaaccagaaacagaaagactggtaggtttccatttgtag 308
Query: 236 acacaggatagaaagaattgtatgtaacatctaaatattactgaggccatgaatttgaaa 295
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 307 acacaggatagaaagaactgtaggtaacatctaaatattactgaggccatgaatttgaaa 248
Query: 296 gaga-atatattgtgaacagatatgcttatcaatg-ttttttatgtcc 341
|||| | |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 247 gagaca-atattgtgaacagatatgcttatcaatgtttttttatgtcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 747
Length adjustment: 9
Effective length of query: 332
Effective length of database: 738
Effective search space: 245016
Effective search space used: 245016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
