Query= MSMg01no364_p07.b1 MSMg01no364_p07.b1 CHROMAT_FILE:
MSMg01no364_p07.b1 PHD_FILE: MSMg01no364_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:18 2005
(343 letters)
>mm_chr7_53572986_53573728
Length = 743
Score = 648 bits (335), Expect = 0.0
Identities = 341/343 (99%)
Strand = Plus / Minus
Query: 1 ggctcccctatctctggctctctgccctggagagtccagttactaaagtctacttgaact 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 543 ggctcccctatctctggctctctgccctagagagtccagttactaaagtctacttgaact 484
Query: 61 gggtctcatctcttcacctcagtgagaccaccaggctctgcttggatgtcccttgctgtt 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 483 gggtctcatctcttcacctcagtgagaccaccaggctctgcttggatgtctcttgctgtt 424
Query: 121 cctcattccagaaagtggaatgggaagaaattggagctgtctagtaagaattgtttgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cctcattccagaaagtggaatgggaagaaattggagctgtctagtaagaattgtttgatt 364
Query: 181 tattgtttctcttcttttgagagcctcagctttgacttgtcttttgtctaaagtctgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tattgtttctcttcttttgagagcctcagctttgacttgtcttttgtctaaagtctgaaa 304
Query: 241 acatatttcccatattttgcccaaatttgtagttgtttataagtctgggtatcaggtgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 acatatttcccatattttgcccaaatttgtagttgtttataagtctgggtatcaggtgct 244
Query: 301 ctttgtgatgaaaacagggatcatgagtggttttaattcataa 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ctttgtgatgaaaacagggatcatgagtggttttaattcataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_p07.g1 MSMg01no364_p07.g1 CHROMAT_FILE:
MSMg01no364_p07.g1 PHD_FILE: MSMg01no364_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:18 2005
(497 letters)
>mm_chr7_53386905_53387802
Length = 898
Score = 884 bits (457), Expect = 0.0
Identities = 484/497 (97%), Gaps = 9/497 (1%)
Strand = Plus / Plus
Query: 1 atttgctaaagtgactatggattcagagagaaaaa-aaaacgtggttcttgtctccgggg 59
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 atttgctaaagtgactatggattcagagagaaaaataaaacgtggttcttgtctccgggg 260
Query: 60 agctgactgtggtctctcctgggagagaggctagaagtacagtatgggaattttgttctt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctgactgtggtctctcctgggagagaggctagaagtacagtatgggaattttgttctt 320
Query: 120 ggcaaggagggccatagcagaataataacctttatcataatattcctagggctcctgcta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcaaggagggccatagcagaataataacctttatcataatattcctagggctcctgcta 380
Query: 180 catgctaggttaatcctctcgtcgcccccgcgggttaaaaggggaaactggtacaggatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgctaggttaatcctctcgtcgcccccgcgggttaaaaggggaaactggtacaggatg 440
Query: 240 cttat----ttttttttccaaaacacacagatcaaatctcatctcaggcagcttgcccca 295
||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttatggaatttt----ccaaaacacacagatcaaatctcatctcaggcagcttgcccca 496
Query: 296 gagcatctgttcctgcctgctcagccgtacttagctcatttggtccttgcaggaataaat 355
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gagcatctgctcctgcctgctcagccgtacttagctcatttggtccttgcaggaataaat 556
Query: 356 gagcagttgtaccaacaagctccatttccccagagcaatctcgatgccttacctccctaa 415
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 557 gagcagttgtaccaacaagctccatttccccagagcaatctcgatgccgtacctccctaa 616
Query: 416 tctcccagtttccggccctgcgcacccctggaactctttctggcctcctggccaccaggg 475
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 617 tctcccagtttccggccctgcacacccctggaactctttctggtctcctggccaccaggg 676
Query: 476 tttggctttggtaagga 492
|||||||||||||||||
Sbjct: 677 tttggctttggtaagga 693
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 898
Length adjustment: 10
Effective length of query: 487
Effective length of database: 888
Effective search space: 432456
Effective search space used: 432456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
