Query= MSMg01no365_a23.b1 MSMg01no365_a23.b1 CHROMAT_FILE:
MSMg01no365_a23.b1 PHD_FILE: MSMg01no365_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:27 2005
(514 letters)
>mm_chr7_98345400_98346313
Length = 914
Score = 919 bits (475), Expect = 0.0
Identities = 502/511 (98%), Gaps = 1/511 (0%)
Strand = Plus / Plus
Query: 5 gaattcattaccctaccatatttctcgagcatcataaatagagattactttattgaagca 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcattacccaacaatatttctcgagcatcataaatagagattactttattgaagca 263
Query: 65 ttgccataaaat-aaaaaaaatattttatgtgcattctaaaataatcctcacataaccta 123
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgccataaaataaaaaaaaatattttatgtgcattctaaaataatcctcacataaccta 323
Query: 124 gcaatatagcttcttttaaactatcactttcagatggaatttatgcatcaacagtatttt 183
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcaatgtagcttcttttaaactatcactttcagatggaatttatgcatcaacagtatttt 383
Query: 184 taaatactgtgtctgtcatgagggagttcattctcttgacagagaattaagatgcttaca 243
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taaatactttgtctgtcatgagggagttcattctcttgacagagaattaagatgcttaca 443
Query: 244 tatatagcagaacagatttttaaaatatgatttttccataaagttgacacaattttgata 303
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 444 tatatagcagaacagatttttaaaatatgatggttccataaagttgacacaattttgata 503
Query: 304 aaggaacaggtactcttctcactcacattttccctttgaaaattcagctgtgatgacact 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaggaacaggtactcttctcactcacattttccctttgaaaattcagctgtgatgacact 563
Query: 364 gcttctgaaataccctttgtgtacttgataagctcagacacaagccaggatccttgagga 423
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 564 gcttctgaaataccctttgtgtacttgataagctctgacacaagccaggatccttgagga 623
Query: 424 ccagtgtttgctttccacatgacaatgtcccatggttgaagggttgaaggttgagacttt 483
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 624 ccagtgtttgctttccacatgacagtgtcccatggttgaagggttgaaggttgagacttt 683
Query: 484 tgtctcaatgtctgaaaagatgaacacaata 514
|||||||||||||||||||||||||||||||
Sbjct: 684 tgtctcaatgtctgaaaagatgaacacaata 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_a23.g1 MSMg01no365_a23.g1 CHROMAT_FILE:
MSMg01no365_a23.g1 PHD_FILE: MSMg01no365_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:28 2005
(438 letters)
>mm_chr7_98518450_98519287
Length = 838
Score = 806 bits (417), Expect = 0.0
Identities = 429/433 (99%)
Strand = Plus / Minus
Query: 1 ctttgtctgtgaccttttaaaacctgtaccagatctttaaaagaagattttaaacccatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ctttgtctgtgaccttttaaaacctgtaccagatctttaaaagaagattttaaacccatc 574
Query: 61 aatattttacaagtttgcattatgtgaaaagaaaggcccattattttctgtgggagtttt 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 573 aatattttacaagtttgcattatgtgaaaggaaaggcccattattttctgtgggagtttt 514
Query: 121 tcccctctttggtatccctgcaaacaacatactggacaaaattcctcttcactctcaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tcccctctttggtatccctgcaaacaacatactggacaaaattcctcttcactctcaatg 454
Query: 181 cttgacagatagggtgggaggaaatcatgggcaacctgtgcaggcagtgggaagggtcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cttgacagatagggtgggaggaaatcatgggcaacctgtgcaggcagtgggaagggtcat 394
Query: 241 agttgctggaatcctcctccacgtaattgattcgccacgcaattgtgcacatttggaagt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 393 agttgctggaatcctcctccacgtaattgattcgccacgcaattgtgcacatttggaaat 334
Query: 301 atgtgggacccaacgcagaaaggtgggggagccactctctgcccatgactcagagctctg 360
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 333 atgtgggacccaacgcagaaagctgggggagccactctctacccatgactcagagctctg 274
Query: 361 aaggcagcacagcttcacgatgttgaagagaaaaaagtactttgatttgaaatggagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aaggcagcacagcttcacgatgttgaagagaaaaaagtactttgatttgaaatggagaaa 214
Query: 421 gcagaggtgtgtg 433
|||||||||||||
Sbjct: 213 gcagaggtgtgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
