NNNCCTCTTAATTTGCGGGCGCTATACGACTCCTATATTCAGAGGATCCG
CGGAATTCTCTTGGTGACGGGCTGTGACCCGGAAGTATAAGCCAGATGAA
CACTTTCCTCCCCTGCTTTCTTTTGATCAGAATGTTTTGTCAAGGAACAG
ACTGATACTAGATCAGGTAGAATGAGGAGGAAGAGGGTGTCAAAGAAAAG
AAAGGCAGAGTCCACATATTGCCGCAAGGCCGTGTAGAAGAACACCACCA
GCTCAGATGGGTAAGAAAGCACGGGCTGTATGTATTGTATGTAAGAACAT
AGTCAATCTCTTTCCATAGGCTCCAACCAGTCTTTGCTACTGTCTTAGTC
AGGGTTTTACTACTGTAAAGAGAAACCATGACCACAGCAACTCATAAAAG
AAAACTTTTAATTGGGGCTGGCTTATTGTTTCAGAGGTTTAGTCCATCAT
CATCACGGAGGAAAACATGGCAGAGTGCAGGCACACATGGTGCCGGAGAA
GGAGCTGAGAGTTCTACATCCTGATCCCCAGGCAGCAGAAGGCTCCGTGT
GCCACACGGAGTTTATCTTGAGCACCGGAGACTTCAAACCTCCCCCACAG
GGACACACTTTCCTCCCCCAAGGCCCCCCTTCCTACAAAATTGTGGCCCT
TCCCTATTAACCAATCCCTTAAAACCCCCAGTCTCTATGGGGGCCTATTT
TTTTTTTAATCCCCCCCGTTTACTTCCCTTGTTGGCAAGGGCCCCTTATT
TTCTTTTGGTTAGAAAAACATGCAACCTACGGGCCCCTTGTTCTTCTTT

NNCCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTAAAGCAGTGGTTCTCAACGTTCC
TAGTGCTGAAACCCTTTAACACAGTTCTTCATTTTGTAGTGACTCCCAAC
CATAAATTATTTTTGTTGCTACTTCATAAGAGTACTTTTGCTACTATTAT
GAGTTGTAATGTAAGTATCTGTGTTTTCCAGTGGTCTTAGGTGTGCCCTG
TGAAAGAGTCGTTTGACCTTCAAGAGAGTTTCACCCATAGGTTGAGAATG
CCTGTTCAAAAAGTCCTAAAATCTCCCAAAATAGGACTACCTGATGGGGA
CAATGCATTTCAAACATGATCATGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTNNNNNNNNCNNNNTNNNNNNNNNNNNNNNNTTNNNNTTT
TTTNTTTTTTTTTTTTTTTTTTNTNTTNTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTNNTTTTTTTTTTTTTTTTTTTTTTTNNTTTTTTTTTTTTTT
TTTTTTTTTTNTTNTTTTNTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTT
NNTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTNNTTTNNNTT
TTTTTTTTTTTTTTTTTNTTTTTNNTNNNTNTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTNNTTTTTTTTTTTTTTTTTN

Query= MSMg01no366_h22.b1 MSMg01no366_h22.b1 CHROMAT_FILE:
MSMg01no366_h22.b1 PHD_FILE: MSMg01no366_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:21 2005
         (492 letters)



>mm_chr7_125206903_125207794
          Length = 892

 Score =  804 bits (416), Expect = 0.0
 Identities = 463/486 (95%), Gaps = 12/486 (2%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattctcttggtgacgggctgtgacccggaagtataagccagatgaacactttcctccc 66
           ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctcttggtgatgggctgtgacctggaagtataagccagatgaacactttcctccc 266

                                                                       
Query: 67  ctgctttcttttgatcagaatgttttgtcaaggaacagactgatactagatcaggtagaa 126
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 267 ctgctttcttttgatcagaatgttttgtcaaggaacagactgatactagaacaggtagaa 326

                                                                       
Query: 127 tgaggaggaagagggtgtcaaagaaaagaaaggcagagtccacatattgccgcaaggccg 186
           ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 327 tgaggaggaagagggtgtcaaagaaaagaaaggcagagtccacaccttgccgcaaggccg 386

                                                                       
Query: 187 tgtagaagaacaccaccagctcagatgggtaagaaagcacgggctgtatgtattgtatgt 246
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgtagaagaataccaccagctcagatgggtaagaaagcacgggctgtatgtattgtatgt 446

                                                                       
Query: 247 aagaacatagtcaatctctttccataggctccaaccagtctttgctactgtcttagtcag 306
           ||||||||||||||||||||||||||||||||||||||||||            ||||||
Sbjct: 447 aagaacatagtcaatctctttccataggctccaaccagtctt------------agtcag 494

                                                                       
Query: 307 ggttttactactgtaaagagaaaccatgaccacagcaactcataaaagaaaacttttaat 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ggttttactactgtaaagagaaaccatgaccacagcaactcataaaagaaaacttttaat 554

                                                                       
Query: 367 tggggctggcttattgtttcagaggtttagtccatcatcatcacggaggaaaacatggca 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tggggctggcttattgtttcagaggtttagtccatcatcatcacggaggaaaacatggca 614

                                                                       
Query: 427 gagtgcaggcacacatggtgccggagaaggagctgagagttctacatcctgatccccagg 486
           ||||||||||| ||||||||| | || ||||||||||||||||||||||||||||| |||
Sbjct: 615 gagtgcaggcaaacatggtgctgaaggaggagctgagagttctacatcctgatcccaagg 674

                 
Query: 487 cagcag 492
           ||||||
Sbjct: 675 cagcag 680


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space:   425124
Effective search space used:   425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)