| Query= MSMg01no367_n01.g1 MSMg01no367_n01.g1 CHROMAT_FILE:
MSMg01no367_n01.g1 PHD_FILE: MSMg01no367_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:05 2005
(345 letters)
>mm_chr7_6152730_6153474
Length = 745
Score = 571 bits (295), Expect = e-167
Identities = 334/349 (95%), Gaps = 6/349 (1%)
Strand = Plus / Plus
Query: 1 aaggccaccctgagaaaatcagtgagattctgtttcaaaataaaacaaattaaaaacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggccaccctgagaaaatcagtgagattctgtttcaaaataaaacaaattaaaaacata 260
Query: 61 ccagggatatagatagttcaataataaagcaaatgccctgggagctgggggcgtggctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagggatatagatagttcaataataaagcaaatgccctgggagctgggggcgtggctca 320
Query: 121 gtggtagagctcctgcctagaatcccccagtgaggggctgggggcgtggctcagtgatag 180
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 gtggtagagcccctgcctagaatcccccagtgaggggctgggggcgtggctcagtggtag 380
Query: 181 agctcctgcttagaatcccctagtgaggggctgggatg---tggctcagtggtagagccc 237
||| ||||| |||||||||| |||||||||||||| | ||||||||||||||||| |
Sbjct: 381 agcccctgcctagaatcccccagtgaggggctggg--ggcgtggctcagtggtagagctc 438
Query: 238 ctgcctagaatcccccagtgaggggctggga-tgtggctcagtggtagagcccctgccta 296
||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||
Sbjct: 439 ctgcctagaatcccccagtgaggggctggaagtgtggctcagtggtagagctcctgccta 498
Query: 297 gaatcccccagtgaggggctgggggcgtggctcagtggtagagcccctg 345
||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 499 gaatcccccagtgagaggctgggggcgtggctcagtggtagagcccctg 547
Score = 368 bits (190), Expect = e-106
Identities = 220/230 (95%), Gaps = 2/230 (0%)
Strand = Plus / Plus
Query: 104 gctgggggcgtggctcagtggtagagctcctgcctagaatcccccagtgaggggctgggg 163
||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 516 gctgggggcgtggctcagtggtagagcccctgcctagaatcccccagtgagggactgggg 575
Query: 164 gcgtggctcagtgatagagctcctgcttagaatcccctagtgaggggctggga-tgtggc 222
||||||||||||| |||||||||||| |||||||||| ||||||||||||| | ||||||
Sbjct: 576 gcgtggctcagtggtagagctcctgcctagaatcccccagtgaggggctggaagtgtggc 635
Query: 223 tcagtggtagagcccctgcctagaatcccccagtgaggggct-gggatgtggctcagtgg 281
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 636 tcagtggtagagcccctgcctagaatcccccagtgaggggctgggggcgtggctcagtgg 695
Query: 282 tagagcccctgcctagaatcccccagtgaggggctgggggcgtggctcag 331
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tagagcccctgcctagaatcccccagtgaggggctgggggcgtggctcag 745
Score = 362 bits (187), Expect = e-104
Identities = 223/237 (94%), Gaps = 6/237 (2%)
Strand = Plus / Plus
Query: 113 gtggctcagtggtagagctcctgcctagaatcccccagtgaggggctgggggcgtggctc 172
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 472 gtggctcagtggtagagctcctgcctagaatcccccagtgagaggctgggggcgtggctc 531
Query: 173 agtgatagagctcctgcttagaatcccctagtgaggggctgggatg---tggctcagtgg 229
|||| |||||| ||||| |||||||||| |||||||| ||||| | |||||||||||
Sbjct: 532 agtggtagagcccctgcctagaatcccccagtgagggactggg--ggcgtggctcagtgg 589
Query: 230 tagagcccctgcctagaatcccccagtgaggggctggga-tgtggctcagtggtagagcc 288
|||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 590 tagagctcctgcctagaatcccccagtgaggggctggaagtgtggctcagtggtagagcc 649
Query: 289 cctgcctagaatcccccagtgaggggctgggggcgtggctcagtggtagagcccctg 345
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 cctgcctagaatcccccagtgaggggctgggggcgtggctcagtggtagagcccctg 706
Score = 333 bits (172), Expect = 1e-95
Identities = 226/248 (91%), Gaps = 10/248 (4%)
Strand = Plus / Plus
Query: 104 gctgggggcgtggctcagtggtagagctcctgcctagaatcccccagtgaggggctgggg 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gctgggggcgtggctcagtggtagagctcctgcctagaatcccccagtgaggggctggaa 469
Query: 164 gcgtggctcagtgatagagctcctgcttagaatcccctagtgaggggctgggatg---tg 220
| ||||||||||| |||||||||||| |||||||||| |||||| ||||||| | ||
Sbjct: 470 gtgtggctcagtggtagagctcctgcctagaatcccccagtgagaggctggg--ggcgtg 527
Query: 221 gctcagtggtagagcccctgcctagaatcccccagtgaggggctgggatg---tggctca 277
||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||
Sbjct: 528 gctcagtggtagagcccctgcctagaatcccccagtgagggactggg--ggcgtggctca 585
Query: 278 gtggtagagcccctgcctagaatcccccagtgaggggctgggggcgtggctcagtggtag 337
|||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 586 gtggtagagctcctgcctagaatcccccagtgaggggctggaagtgtggctcagtggtag 645
Query: 338 agcccctg 345
||||||||
Sbjct: 646 agcccctg 653
Score = 242 bits (125), Expect = 3e-68
Identities = 158/171 (92%), Gaps = 6/171 (3%)
Strand = Plus / Plus
Query: 100 gggagctgggggcgtggctcagtggtagagctcctgcctagaatcccccagtgaggggct 159
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ggga-ctgggggcgtggctcagtggtagagctcctgcctagaatcccccagtgaggggct 624
Query: 160 gggggcgtggctcagtgatagagctcctgcttagaatcccctagtgaggggctgggatg- 218
|| | ||||||||||| |||||| ||||| |||||||||| |||||||||||||| |
Sbjct: 625 ggaagtgtggctcagtggtagagcccctgcctagaatcccccagtgaggggctggg--gg 682
Query: 219 --tggctcagtggtagagcccctgcctagaatcccccagtgaggggctggg 267
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 cgtggctcagtggtagagcccctgcctagaatcccccagtgaggggctggg 733
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 69
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 9
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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