Query= MSMg01no368_g24.b1 MSMg01no368_g24.b1 CHROMAT_FILE:
MSMg01no368_g24.b1 PHD_FILE: MSMg01no368_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:52 2005
(464 letters)
>mm_chr7_141364254_141365117
Length = 864
Score = 787 bits (407), Expect = 0.0
Identities = 420/429 (97%), Gaps = 8/429 (1%)
Strand = Plus / Minus
Query: 5 gaattctagcatttccctgggctctctcaacttccaagtaatttcactgtgccatttttg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gaattctagcatttccctgggctctctcaacttccaagtaatttcactgtgccatttttg 377
Query: 65 taataagtttctgatgccaaattcctccaccagaatgaaaactgagcagcttttcttttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 taataagtttctgatgccaaattcctccaccagaatgaaaactgagcagcttttcttttg 317
Query: 125 attcagggatgagtttgtgggaccagagaggaacttacgaagtggccagagcctcccttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 attcagggatgagtttgtgggaccagagaggaacttacgaagtggccagagcctcccttc 257
Query: 185 tgagcaaggaccctgggatcccaggacagagcatcccagccaaggtcagatgtttcttgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tgagcaaggaccctgggatcccaggacagagcatcccagccaaggtcagatgtttcttgc 197
Query: 245 cttgccttgccttttcctcccctttctctttcccctttccgtttcccttcccttgtctct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 cttgccttgccttttcctcccctttctctttcccctttccgtttcccttcccttgtctct 137
Query: 305 tctctcttctcttgctctctctctctctctctctctctctctctctctctctctctctct 364
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 136 tctctcttctcttg--------ctctctctctcgctctctctctctctctctctctctct 85
Query: 365 ctctctctcttccccttccttccttccttccttccttccttccttccttccttccttcct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 ctctctctcttccccttccttccttccttccttccttccttccttccttccttccttcct 25
Query: 425 tccttcctt 433
|||||||||
Sbjct: 24 tccttcctt 16
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 95
Number of extensions: 38
Number of successful extensions: 38
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_g24.g1 MSMg01no368_g24.g1 CHROMAT_FILE:
MSMg01no368_g24.g1 PHD_FILE: MSMg01no368_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:52 2005
(467 letters)
>mm_chr7_141248599_141249465
Length = 867
Score = 857 bits (443), Expect = 0.0
Identities = 461/467 (98%)
Strand = Plus / Plus
Query: 1 tggagttatcaggctcagtgtgacaccttgctccatcactctatgtgagatcttagacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggagttatcaggctcagtgtgacaccttgctccatcactctatgtgagatcttagacct 260
Query: 61 ctcatagtcacagcatctgaattcatgaggcctccatatgacatcactacatgtcagcac 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 ctcatagtcacagcatctgaattcatgaggcctccatatgaaatcactacatgtcagcac 320
Query: 121 tgctggggtgggggatgttgtaagacaatggctgcaggagacaaagaggcagcttagcac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctggggtgggggatgttgtaagacaatggctgcaggagacaaagaggcagcttagcag 380
Query: 181 gtaagggtacctggctgcttttcagagaaacaaagtttgattgccagcacccacatggca 240
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 gtaagggtacctggttgcttttcagagaaacaaagtttgattaccagcacccacatggca 440
Query: 241 gcttataactgtctgaaactctgatcccagagaatccaatgtccttcttgggtactgcac 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcttataaccgtctgaaactctgatcccagagaatccaatgtccttcttgggtactgcac 500
Query: 301 gcaagtgatgaaaacagacacaaatgcaggcaaaacaaccatataaataaatgagacatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 gcaagtgatgaaaacagacacaaatgcaggcaaaacaaccatataaataaacgagacatt 560
Query: 361 caaaaacattttaaaaagacagtgactgcagaggcctgaatagagaagccaagcacgctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaaaacattttaaaaagacagtgactgcagaggcctgaatagagaagccaagcacgctt 620
Query: 421 tccaccaggtcagctttcacagcaagggtgacatcatgcacagcaat 467
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tccaccaggtcagctttcacagcaagggtgacatcatgcacagcaat 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
