Query= MSMg01no368_n12.b1 MSMg01no368_n12.b1 CHROMAT_FILE:
MSMg01no368_n12.b1 PHD_FILE: MSMg01no368_n12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:24 2005
(576 letters)
>mm_chr7_95201050_95202028
Length = 979
Score = 1056 bits (546), Expect = 0.0
Identities = 570/580 (98%), Gaps = 5/580 (0%)
Strand = Plus / Minus
Query: 1 ttattgcataccctttgctttccattcccttaataaaagcttctttcaaagagctgaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ttattgcataccctttgctttccattcccttaataaaagcttctttcaaagagctgaaaa 720
Query: 61 acctagaggtcattttttgttgttattttttattccttata----ttttataggaaggtc 116
|||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 719 acctagagctcattttttgttgttattttttattccttatattttttttatagggaggtc 660
Query: 117 tgaaaaattgtgctaagatttattctgcaattaaaacataaagaatgatataatagccct 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tgaaaaattgtgctaagatttattctgcaattaaaacataaagaatgatataatagccct 600
Query: 177 gcagaatgttgaagggaaggcttatcccagatcacatttgcagagaacagctttgaaaaa 236
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 599 gcagaatgttgaagggaaggcttatcccagatcacctttgcagagaacagctttgaaaaa 540
Query: 237 tatgacttctggtcttattgctgtagttgaacaggagtggaagaacacagcatataattc 296
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tatgacttctggtcacattgctgtagttgaacaggagtggaagaacacagcatataattc 480
Query: 297 cctgactgaaataataagtgtggctggaacactcctctccctttctattcttcccttaat 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cctgactgaaataataagtgtggctggaacactcctctccctttctattcttcccttaat 420
Query: 357 tctcatcaccgctagctcctcattattcttccattctgtagatcatctctcaaaatgact 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tctcatcaccgctagctcctcattattcttccattctgtagatcatctctcaaaatgact 360
Query: 417 tttcagattccctaagcctgagtgacaagatcctcccgtgagatcataggtctctctggt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tttcagattccctaagcctgagtgacaagatcctcccgtgagatcataggtctctctggt 300
Query: 477 ctgtgccattttttttttttttgctggactatgccatagggaggctgagaaatacaagaa 536
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ctgtgcca-tttttttttttttgctggactatgccatagggaggctgagaaatacaagaa 241
Query: 537 cagagactatttctttgctattgctttattagtagtacta 576
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cagagactatttctttgctattgctttattagtagtacta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 979
Length adjustment: 10
Effective length of query: 566
Effective length of database: 969
Effective search space: 548454
Effective search space used: 548454
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_n12.g1 MSMg01no368_n12.g1 CHROMAT_FILE:
MSMg01no368_n12.g1 PHD_FILE: MSMg01no368_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:24 2005
(545 letters)
>mm_chr7_95018686_95019631
Length = 946
Score = 986 bits (510), Expect = 0.0
Identities = 537/546 (98%), Gaps = 1/546 (0%)
Strand = Plus / Plus
Query: 1 ttacctacataacaaagttgacacattcaatattctcaatatcaacttcgaaatttcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttacctacataacaaagttgacacattcaatattctcaatatcaacttcgaaatttcagt 260
Query: 61 gtttgaaattcaacctttgaatcccaggagaatgagtcctgaagtgtggtactttttgaa 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 gtttgaaattcaacctttgaatcccaggagaatgaatcctgaagtgtggtactttttgaa 320
Query: 121 agttcacagagcccatctttggataagaaatatattgagtacatttctgactcatgaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttcacagagcccatctttggataagaaatatattgagtacatttctgactcatgaact 380
Query: 181 gtctacacaatccacaattagataaatgctttattagagttctctcagtggtaaggttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtctacacaatccacaattagataaatgctttattagagttctctcagtggtaaggttag 440
Query: 241 aagaaattgtttttttgtttgtttggttttttt-gttttgtttttggttgtggacaaatc 299
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 441 aagaaattgtttttttgtttgtttggttttttttgttttgtttttggttttggacaaatc 500
Query: 300 aaaagatcaatagaaaaattttaatgttcatgatacttacctccccactgtgatagaata 359
||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 501 aaaggatcaatagaaaaattttaatgttcatgatacttagcttttcactgtgatagaata 560
Query: 360 tcatttccaaagaagaaactggtgtgtttctcttatagtgtgactatacatgcctattac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcatttccaaagaagaaactggtgtgtttctcttatagtgtgactatacatgcctattac 620
Query: 420 ccagacaaataagacccagaattttaatataaaaaatgttaatattgatgagcacactgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccagacaaataagacccagaattttaatataaaaaatgttaatattgatgagcacactgt 680
Query: 480 acttcacatatttcctgtatttaggataaatacatttctagatttgatttctagctactc 539
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acttcacgtatttcctgtatttaggataaatacatttctagatttgatttctagctactc 740
Query: 540 tgagaa 545
||||||
Sbjct: 741 tgagaa 746
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 946
Length adjustment: 10
Effective length of query: 535
Effective length of database: 936
Effective search space: 500760
Effective search space used: 500760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
