CCTCATXXXXXXXXXXXXXXXXXXXXXXXCTATTTCCAGAGGATCCGCGG
AATTCTCTGGTGTTCCTCAGAGTTTAGAACACTGGCTGGGTGGTGATGGC
CACGGGGTGAATAAGGTGATCCTAGGGCTGTAGCTGAGTTGGTCGAGTGC
TTGCCCAGGATGCTTGACGGCCTGGGTTCTATCTCCACCATGGCATCACC
TGTAGTCCCAGTGCTGGGGAGGGGAGCATAAGCAGAATCGTCAGATGCAC
AGAGGTCAAGGCCAGCCTGGAACACAGGAAAAATAAAAAGGTAATGCCGA
CCTCACTGATTCCAAGGGCGCTATCTCCTTATCTCCCGTTGAGATTGCTT
GATTTATTTATTGTTTTCTGCTCAGTCAGTCGCTGAGTCTTAGGACTAAG
AAGATGGAGCTGGGACTCCAGCTATTGTTTTCTGTCCCTACCTGTTTTCT
GTCCCTATCTACTCCACAAGTAAGGAGGTGACCCTTGAGGAGTTTACATA
TGGAGACTAGCTGACTTTCCTGCCTGTCTTCCTTCTCCGATGGTACCTGG
TCATTGTAATTGAATGGCATTTTTAATATTTTCCAAATGCCCCTCTCACC
CTTTGGCTGATGATCCGAACAATAGGTGCATGTATTAGGTGGTGCCTGCT
GACCTTCACTTATATTGGAATATGAGGTACCGTGCATTCTAACTGACCTG
GTTCTCCCTTGTGCAGTATC

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCTATAACTGATAAACTACTTCAGCAAAGTGG
CTGGATATAAAATTACCTCACAGAAATTAGTAGCCTTTCTTTATACAAAT
AATAAATGGGCTGGGAAGGAAGTTAGAGAAACAATACCCTTCACAATAGC
CACAAATAATATAAATTATCTTGGTGTAACTCTAACCAAACAAGTGAAAG
ATCTGTTTGTTTGACAAGAACTTCAAGTCTCTGAAGAAAAAAATTGAAGA
AGCTATCAGAAGATGGGATGTATCCCCCATGCTCATGGATTAGTAGGATG
AACATAGTAAAAATGGGCATCTTACTAAAAGCAGATTCAATGCAATCCCC
ATCAAAATTCCAACAGCTTCGAAAGTGTCCTTGTGGTATGGTGAAACATC
TCTTAGGTATATGCCCAGGAGTGATGTAGCTGGGTCTTGAGGTAAAACTA
TTCCCAATTTTTTGAGAAATCACAAAATTGAAATTCCAAAAAATTCAAGG
TCTTTATAGACCTTGTAAAAGCAATTTTCAACTTCATATGGAAAAACAAA
AATCCTAGGATAGCAAAAACAACCCTGTACTATAAAAGAACTCCTGGAGG
TTTCCTCATCTCTGACCCTATGCTGTACTAGAGAGCAACAGTGATATAAA
AAACTGAATGTTATTGGCATTAAAACA

Query= MSMg01no368_p16.b1 MSMg01no368_p16.b1 CHROMAT_FILE:
MSMg01no368_p16.b1 PHD_FILE: MSMg01no368_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:34 2005
         (526 letters)



>mm_chr7_80826313_80827238
          Length = 926

 Score =  882 bits (456), Expect = 0.0
 Identities = 500/518 (96%), Gaps = 6/518 (1%)
 Strand = Plus / Plus

                                                                       
Query: 9   ggaattctctggtgttcctcagagtttagaacactggctgggtggtgatggccacggggt 68
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ggaattctctggtgtttctcagagtttagaacactggctgggtggtgatggccacggggt 268

                                                                       
Query: 69  gaataaggtgatcctagggctgtagctgagttggtcgagtgcttgcccaggatgcttgac 128
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 269 gaataaggtgatcctagggctgtagctgagttggttgagtgcttgcccaggatgcttgat 328

                                                                       
Query: 129 ggcctgggttctatctccaccatggcatcacctgtagtcccagtgctggggaggggagca 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ggcctgggttctatctccaccatggcatcacctgtagtcccagtgctggggaggggagca 388

                                                                       
Query: 189 taagcagaatcgtcagatgcacagaggtcaaggccagcctggaacacaggaaaaataaaa 248
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 389 taagcagaatcgtcagatgcacaggggtcaaggccagcctggaacacaggaaaaataaaa 448

                                                                       
Query: 249 aggtaatgccgacctcactgattccaagggcgctatctccttatctcccgttgagattgc 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aggtaatgccgacctcactgattccaagggcgctatctccttatctcccgttgagattgc 508

                                                                       
Query: 309 ttgatttatttattgttttctgctcagtcagtcgctgagtcttaggactaagaagatgga 368
           |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 509 ttgatttatttattgttttctgctcagtcagtcgctgagtcttagggctgagaagatgga 568

                                                                       
Query: 369 gctgggactccagctattgttttctgtccctacctgttttctgtccctatctactccaca 428
           || |||||||||||| ||||||||||||||||||||      | | |||||| |||||||
Sbjct: 569 gccgggactccagctgttgttttctgtccctacctg------ggctctatctgctccaca 622

                                                                       
Query: 429 agtaaggaggtgacccttgaggagtttacatatggagactagctgactttcctgcctgtc 488
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 agtaaggaggtgacccttgaggagtttacatatggagactagctgactttcctgcctgtc 682

                                                 
Query: 489 ttccttctccgatggtacctggtcattgtaattgaatg 526
           || |||||||||||||||||||||||||||||||||||
Sbjct: 683 tttcttctccgatggtacctggtcattgtaattgaatg 720


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space:   472656
Effective search space used:   472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)