Query= MSMg01no369_k20.b1 MSMg01no369_k20.b1 CHROMAT_FILE:
MSMg01no369_k20.b1 PHD_FILE: MSMg01no369_k20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:28 2005
(464 letters)
>mm_chr7_101580872_101581734
Length = 863
Score = 851 bits (440), Expect = 0.0
Identities = 458/464 (98%), Gaps = 1/464 (0%)
Strand = Plus / Plus
Query: 1 taaatgaagctgcggtagtgattatatttcaaacccataaagacatggttttgcagtgaa 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 taaatgaagctgcggtagtgattatatttcgaacccataaagacatggttttgcagtgaa 260
Query: 61 atgaggatatagaaaagtgttagctatccactcttcaaaaaacgagaaggcttgaggcag 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 atgaggatatagaaaagtgttagctatccactcttcaaaaa-cgagaaggcttgaggcag 319
Query: 121 taagataaacagatcccatgtgtgtcataacagcctaggtcttgtactgcaacctcacct 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 320 taagataaacagatcccatgtgtgtcataacagcctaggtcttctactgcaacctcacct 379
Query: 181 caacataaattaaatctgtaagtaaatgaatgttcctcgaaatgtctggcgctggtgtct 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 380 caacataaattaaatctgtaagtaaatgaatgctcctcgaaatgtctggcgctggtgtct 439
Query: 241 tgtacagtatggtggaggattacagttgtctcaactactctctgattttaacggggatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgtacagtatggtggaggattacagttgtctcaactactctctgattttaacggggatct 499
Query: 301 ttagacaggtctagaaactaactaaagactgattaatgagaaaaaagccctaatattcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttagacaggtctagaaactaactaaagactgattaatgagaaaaaagccctaatattcat 559
Query: 361 ttgatatacaatagggattctcacaaaggtatgaaaatgtaagaagtcacttatcacaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttgatatacaatagggattctcacaaaggtatgaaaatgtaagaagtcacttatcacaag 619
Query: 421 gttattttataatttacaagggataataatcacatgaagacatt 464
||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 620 gttattttataatttacaagggataataaacacatgaaaacatt 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 863
Length adjustment: 10
Effective length of query: 454
Effective length of database: 853
Effective search space: 387262
Effective search space used: 387262
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_k20.g1 MSMg01no369_k20.g1 CHROMAT_FILE:
MSMg01no369_k20.g1 PHD_FILE: MSMg01no369_k20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:28 2005
(466 letters)
>mm_chr7_101757387_101758252
Length = 866
Score = 847 bits (438), Expect = 0.0
Identities = 459/466 (98%)
Strand = Plus / Minus
Query: 1 ctgtctttatctattgtttgctttaatccacagagttaaattatctcaattcatgaccaa 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ctgtctttatctattgtttgttttaatccacagagttaaattatctcaattcatgaccaa 607
Query: 61 aaagaaagattacctaaaaaacctgagtcatcattcttgccaagtcaattttgtggaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 aaagaaagattacctaaaaaacctgagtcatcattcttgccaagtcaattttgtggaaat 547
Query: 121 caattgtagaatggggaaacagacactagaggatttgatagatgccattctttgggttca 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 caattgtacaatggggaaacagacactagaggatttgatagatgccattctttgggttca 487
Query: 181 taaaaggattatccatgactctatccatggataaaaaatattgtgtgtctagtcactgaa 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 taaaagcattatccatgactctatccatggataaaaaatattgtgtgtctagtcactgaa 427
Query: 241 aattattgtagaaatctatgtgcctatgtgaacaaatgtaaaacacaaagcaagcaaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aattattgtagaaatctatgtgcctatgtgaacaaatgtaaaacacaaagcaagcaaaca 367
Query: 301 aggaggcccttggtaactcactgtttacacagaggtgtcaaacttctctatgtatcattg 360
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 366 aggaggcccttggtaactcactgtttacacagaggtgccaaacttctctatgaatcattg 307
Query: 361 agccgtgggagatattgttgttattagttttagctatgagctggagaaggatacttctgc 420
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 306 agccatgggagatattgttgttattagttttagctatgagcttgagaaggatacttctgc 247
Query: 421 acagtagttgggctggatattgggacagagcatgtaggttcctgtg 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 acagtagttgggctggatattgggacagagcatgtaggttcctgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
