Query= MSMg01no369_l05.b1 MSMg01no369_l05.b1 CHROMAT_FILE:
MSMg01no369_l05.b1 PHD_FILE: MSMg01no369_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:30 2005
(277 letters)
>mm_chr7_143267511_143268187
Length = 677
Score = 520 bits (269), Expect = e-152
Identities = 275/277 (99%)
Strand = Plus / Plus
Query: 1 ggtagttttcaggtgattttgttagcctggtgctacagccaacattgcaacgtggttgaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 ggtagttttcaggtgattttgttagcctggtgctacagccaacattgcaatgtggttgaa 260
Query: 61 gttgttccttctaaacctaccaaatcctcttcactcacttagattcctatggatgaattc 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 gttgttccttctaaacctaccaaatcctcctcactcacttagattcctatggatgaattc 320
Query: 121 ctccttaatattggagtgctggtctctattttctctcacgatcttttctcttttttcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctccttaatattggagtgctggtctctattttctctcacgatcttttctcttttttcctt 380
Query: 181 aggttctccccttgctttcagagttcatccagtcctgccacccgggtggcctgagtgtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggttctccccttgctttcagagttcatccagtcctgccacccgggtggcctgagtgtag 440
Query: 241 caggattggctttgtctttctgtaaagtgattctcca 277
|||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggattggctttgtctttctgtaaagtgattctcca 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no369_l05.g1 MSMg01no369_l05.g1 CHROMAT_FILE:
MSMg01no369_l05.g1 PHD_FILE: MSMg01no369_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:30 2005
(358 letters)
>mm_chr7_143405537_143406294
Length = 758
Score = 634 bits (328), Expect = 0.0
Identities = 349/360 (96%), Gaps = 8/360 (2%)
Strand = Plus / Minus
Query: 1 accttcatgcttagacatgacactggccctgatgccctagaaatatggaaccagcaagtg 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 556 accttcatgcttagacatgacactggccctgttgccctagaaatatggaaccagcaagtg 497
Query: 61 tgtgattctgagtctcagttaaagactggctcccgctagggtcgaatgatcaaatttcat 120
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgtgattctgagtctcagtcaaaaactggctcccgctagggtcgaatgatcaaatttcat 437
Query: 121 aagctgacttggaccaaagtcatgtgtgtggctcttatagcccaaaattgttcttttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aagctgacttggaccaaagtcatgtgtgtggctcttatagcccaaaattgttcttttttt 377
Query: 181 ccccctctaatatctaccaaacagaacaatgagggcctttgaaattccccagagacctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ccccctctaatatctaccaaacagaacaatgagggcctttgaaattccccagagacctac 317
Query: 241 tattaaaac----ttttatttacaactgcaccataccatctaatgtgttaaccaggtgtt 296
||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tattaaaaccaca----atttacaactgcaccataccatctaatgtgttaaccaggtgtt 261
Query: 297 cggtgttattgtttgaaactctaccttggtttaaatcaaatgaagaaaagccaaaagtcc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cggtgttattgtttgaaactctaccttggtttaaatcaaatgaagaaaagccaaaagtcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
