Query= MSMg01no371_a05.b1 MSMg01no371_a05.b1 CHROMAT_FILE:
MSMg01no371_a05.b1 PHD_FILE: MSMg01no371_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:15 2005
(604 letters)
>mm_chr7_95998080_95999083
Length = 1004
Score = 878 bits (454), Expect = 0.0
Identities = 472/478 (98%)
Strand = Plus / Plus
Query: 1 cttagacataaacacctttaaataattgtcactgatcacccatattccatagaccttata 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 201 cttagacataaacacctttaaataattgtcactgatcacctgtattccatagacctttta 260
Query: 61 agtgtcacacctgtctattgttcagatcagaactccacaaagtggaatggcctgctcttt 120
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtctcacatctgtctattgttcagatcagaactccacaaagtggaatggcctgctcttt 320
Query: 121 gtttctaagttttctctagtcacaagaaagatgctgcaggccaactttcagaatacaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttctaagttttctctagtcacaagaaagatgctgcaggccaactttcagaatacaatc 380
Query: 181 aatcccctgacacttgccctactttcaagagtaggccatgcagaactctgtctctagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatcccctgacacttgccctactttcaagagtaggccatgcagaactctgtctctagagg 440
Query: 241 tgcctagcagcccatatagcaggcatcttggtaaatggcttcttggcctgcttccatggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcctagcagcccatatagcaggcatcttggtaaatggcttcttggcctgcttccatggg 500
Query: 301 aagataagaagaaaggatatttaaagcacttatatggtttgtgaacttcaagattcctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagataagaagaaaggatatttaaagcacttatatggtttgtgaacttcaagattcctgt 560
Query: 361 cagcagaactgcaagtctgttcaatgctacttctggctcttagtttcttttttactttct 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 cagcagaactgcaagtctgttcaatgctacttctggctcttagtttctttcttactttct 620
Query: 421 cctttttgaactccaaccatccctctataatgtaggatttgtctcctgtttcttccct 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cctttttgaactccaaccatccctctataatgtaggatttgtctcctgtttcttccct 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_a05.g1 MSMg01no371_a05.g1 CHROMAT_FILE:
MSMg01no371_a05.g1 PHD_FILE: MSMg01no371_a05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:15 2005
(635 letters)
>mm_chr7_96135303_96136338
Length = 1036
Score = 1137 bits (588), Expect = 0.0
Identities = 621/632 (98%), Gaps = 1/632 (0%)
Strand = Plus / Minus
Query: 5 gaattctgagttctgctgtgccagagagcccagaacatcagtcatcccacctgtgttggg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 gaattctgagttctgctgtgccagagagcccagaacatcagtcatcccacctgtgttggg 777
Query: 65 cacacagtggacagactgtagcttctttttttgatacctccacatccacactctatctga 124
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 776 cacacagtggacagactgtagcttctttttatgttacctccacatccacactctatctga 717
Query: 125 aatcccatctacctgcttcttctcttttcattgaaaaaaccaaatatatttctcataatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 aatcccatctacctgcttcttctcttttcattgaaaaaaccaaatatatttctcataatc 657
Query: 185 atatttcatttattgcttatattgtattgattaatagagtgcctggaacaacaatggtag 244
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 atatctcatttattgcttatattgtattgattaatagagtgcctggaacaacaatggtag 597
Query: 245 ttgaacatttgaagaattaatgatcatggtattttacacaaattatagcaaataaaattt 304
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 596 ttgaacatttgaaggattaatgatcatggtattttacataaattatagcaaataaaattt 537
Query: 305 tattagtaataatactgcaaaagtgacaacaaaaccctataatgcctacatatgttagta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tattagtaataatactgcaaaagtgacaacaaaaccctataatgcctacatatgttagta 477
Query: 365 ggcactctgaataaatttttcttcaaaaagacttagcaatgtggttgtagctatttatac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ggcactctgaataaatttttcttcaaaaagacttagcaatgtggttgtagctatttatac 417
Query: 425 ttaactgttgaaaaaa-tggattcagaaattaggtgatacattcaaattaatgaagttaa 483
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 416 ttaactgatgaaaaaaatggattcagaaattaggtgatacattcaaattaatgaaggtaa 357
Query: 484 gacaaaagagacatctctgttgggaaggatagataagtattgtcttaaatatattatttc 543
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 356 gacaaaagagacatctctgttgggaaggatagataagtattgtattaaatatattatttc 297
Query: 544 tgcattaactattgaataatatgagatttcatgtaacatatcagaaactatttattaagc 603
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 296 tgcattacctattgaataatataagatttcatgtaacatatcagaaactatttattaagc 237
Query: 604 tgtacatgttatatgtcactatatttaatatg 635
||||||||||||||||||||||||||||||||
Sbjct: 236 tgtacatgttatatgtcactatatttaatatg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1036
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1026
Effective search space: 641250
Effective search space used: 641250
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
